Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MTCO2P19-201ENST00000427513 598 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 BRWD1P3-201ENST00000428816 390 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC12P31275 RABEPKP1-201ENST00000440529 1026 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 PGBD4P3-201ENST00000440731 581 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AL662791.1-201ENST00000441992 928 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 DNAJC19P5-201ENST00000443295 316 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AC073109.1-201ENST00000445066 978 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC12P31275 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC12P31275 USP9YP34-201ENST00000453983 808 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 VPS25P1-201ENST00000455691 508 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC12P31275 SNX18P26-201ENST00000458433 740 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC12P31275 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC12P31275 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC12P31275 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC12P31275 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC12P31275 PTGES3P3-201ENST00000511479 482 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 KCTD9P2-201ENST00000512203 1013 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AC074344.1-201ENST00000512823 224 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC12P31275 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXC12P31275 AC008055.1-201ENST00000547032 609 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC12P31275 CYCSP38-201ENST00000559840 322 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC12P31275 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC12P31275 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC12P31275 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC12P31275 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC12P31275 PSMA6P4-201ENST00000603247 718 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AP000907.4-201ENST00000604143 237 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AC092954.2-201ENST00000609103 430 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AC108673.3-201ENST00000609183 335 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AL592295.2-201ENST00000612578 206 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AC009704.2-201ENST00000618739 483 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC12P31275 AC024884.1-201ENST00000620583 399 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC12P31275 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXC12P31275 AC110994.2-201ENST00000635481 492 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 MIR3688-2-201ENST00000636963 87 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 SOCS5P3-201ENST00000425115 1576 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC12P31275 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC12P31275 AL136984.1-201ENST00000607611 1893 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC12P31275 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXC12P31275 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXC12P31275 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC12P31275 PWAR1-201ENST00000624188 2414 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC12P31275 NLRP3P1-201ENST00000622303 1785 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 CYP2G2P-201ENST00000594920 1485 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC12P31275 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HOXC12P31275 AP002907.1-201ENST00000606361 1430 ntBASIC5.57□□□□□ -1.52
HOXC12P31275 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.56□□□□□ -1.52
HOXC12P31275 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC12P31275 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXC12P31275 AC009313.2-201ENST00000417893 1941 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC12P31275 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HOXC12P31275 OR11H5P-202ENST00000641612 1325 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC12P31275 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HOXC12P31275 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC12P31275 Y_RNA.372-201ENST00000365599 102 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
HOXC12P31275 Y_RNA.450-201ENST00000384198 113 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 Y_RNA.453-201ENST00000384223 109 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 SNORA17A-201ENST00000391185 133 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 GSTA9P-201ENST00000406231 611 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 MIR1305-201ENST00000408300 86 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 MIR1277-201ENST00000408536 78 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXC12P31275 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXC12P31275 NPM1P4-201ENST00000414095 812 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXC12P31275 UBE2V1P14-201ENST00000415815 558 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 RPS3P2-201ENST00000421346 701 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 AC009480.2-201ENST00000422916 432 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 RPL12P12-201ENST00000424633 501 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 ZNF863P-201ENST00000426746 417 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 BX890604.2-201ENST00000427883 474 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 AC000111.3-201ENST00000433478 193 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC12P31275 CLUHP1-201ENST00000435012 1190 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXC12P31275 AL121601.2-201ENST00000438019 707 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 AL450263.2-201ENST00000439400 589 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXC12P31275 NFU1P2-201ENST00000448700 469 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 GAPDHP17-201ENST00000449858 1001 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 Z82190.1-201ENST00000454534 490 ntBASIC5.56□□□□□ -1.52
HOXC12P31275 MTCO1P42-201ENST00000457379 726 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms