Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 SNORA73.2-201ENST00000364946 201 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 RNU1-63P-201ENST00000383902 164 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 RNU6-244P-201ENST00000391028 104 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 RNU11-4P-201ENST00000391149 133 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF1P30408 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF1P30408 PTGES3P2-201ENST00000407942 482 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 AC093578.1-201ENST00000415219 368 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.35□□□□□ -1.55
TM4SF1P30408 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 RPEP2-201ENST00000432149 701 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF1P30408 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.35□□□□□ -1.55
TM4SF1P30408 CLIC4P1-201ENST00000453177 535 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF1P30408 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF1P30408 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF1P30408 HAUS1P3-201ENST00000523909 662 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.35□□□□□ -1.55
TM4SF1P30408 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 AC008083.2-201ENST00000546707 476 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF1P30408 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.35□□□□□ -1.55
TM4SF1P30408 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.35□□□□□ -1.55
TM4SF1P30408 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.35□□□□□ -1.55
TM4SF1P30408 MIR5685-201ENST00000579080 79 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 MIR3944-201ENST00000581277 108 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 AC112230.1-201ENST00000604342 547 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.35□□□□□ -1.55
TM4SF1P30408 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF1P30408 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF1P30408 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 AC024023.1-201ENST00000624530 922 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF1P30408 AC008013.2-202ENST00000637965 364 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
TM4SF1P30408 FAM91A3P-201ENST00000456826 2544 ntBASIC5.35□□□□□ -1.55
TM4SF1P30408 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF1P30408 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF1P30408 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF1P30408 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF1P30408 MIR133A2-201ENST00000347538 102 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 RNA5SP124-201ENST00000362739 110 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 HMGB1P13-201ENST00000406019 642 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 RAB9AP3-201ENST00000412737 573 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AC062016.2-201ENST00000420950 676 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.34□□□□□ -1.55
TM4SF1P30408 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.34□□□□□ -1.55
TM4SF1P30408 CDY14P-201ENST00000431260 1014 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AP000936.3-201ENST00000438127 255 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 CDY12P-201ENST00000440679 1015 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 CDY13P-201ENST00000445813 1015 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AC092685.1-201ENST00000447960 1243 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 RAB9AP1-201ENST00000449393 573 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 CDY23P-201ENST00000451661 1014 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.34□□□□□ -1.55
TM4SF1P30408 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF1P30408 MTCO2P9-201ENST00000503214 694 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AC025459.1-201ENST00000504072 156 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF1P30408 AC026726.1-201ENST00000512859 601 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.34□□□□□ -1.55
TM4SF1P30408 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.34□□□□□ -1.55
TM4SF1P30408 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.34□□□□□ -1.55
TM4SF1P30408 AC113192.3-201ENST00000529152 742 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF1P30408 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.34□□□□□ -1.55
TM4SF1P30408 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.34□□□□□ -1.55
TM4SF1P30408 RN7SL339P-201ENST00000580597 296 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AC091178.1-203ENST00000584586 279 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AC107982.3-201ENST00000584957 985 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF1P30408 AL391834.1-201ENST00000609609 560 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AP004607.9-201ENST00000618202 316 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 AC097460.3-201ENST00000623099 442 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF1P30408 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF1P30408 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF1P30408 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.34□□□□□ -1.55
TM4SF1P30408 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TM4SF1P30408 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
TM4SF1P30408 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.33□□□□□ -1.56
TM4SF1P30408 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TM4SF1P30408 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.33□□□□□ -1.56
TM4SF1P30408 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 AC093297.3-201ENST00000607056 2517 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 MTND5P11-201ENST00000511037 1812 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 OR11H4-201ENST00000315409 1082 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 SNORA63.1-201ENST00000362493 131 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms