Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.99□□□□□ -1.45
CNGA1P29973 AC087385.3-201ENST00000620477 187 ntBASIC5.99□□□□□ -1.45
CNGA1P29973 AC073869.8-201ENST00000641806 335 ntBASIC5.99□□□□□ -1.45
CNGA1P29973 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CNGA1P29973 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.99□□□□□ -1.45
CNGA1P29973 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.99□□□□□ -1.45
CNGA1P29973 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.99□□□□□ -1.45
CNGA1P29973 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CNGA1P29973 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CNGA1P29973 AP000756.2-201ENST00000624168 2567 ntBASIC5.99□□□□□ -1.45
CNGA1P29973 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.99□□□□□ -1.45
CNGA1P29973 AC109315.1-201ENST00000584143 1347 ntBASIC5.99□□□□□ -1.45
CNGA1P29973 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CNGA1P29973 AP000776.1-201ENST00000530032 1663 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.98□□□□□ -1.45
CNGA1P29973 AC079097.1-201ENST00000512187 1399 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CNGA1P29973 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 RN7SKP149-201ENST00000363008 344 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 AL139098.1-201ENST00000407291 389 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.98□□□□□ -1.45
CNGA1P29973 AL450992.3-201ENST00000413192 568 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 MTND2P18-201ENST00000419962 1030 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AC006960.1-201ENST00000419980 153 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 OR2AM1P-201ENST00000422137 422 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AL136231.1-201ENST00000429407 730 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AC091390.1-201ENST00000433904 331 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 MTND2P40-201ENST00000436718 841 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 PRPF38AP2-201ENST00000438179 851 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.98□□□□□ -1.45
CNGA1P29973 AC092393.1-201ENST00000439625 742 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 AC073465.2-201ENST00000440938 498 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 MTND2P22-201ENST00000444325 1033 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.98□□□□□ -1.45
CNGA1P29973 AC006511.1-201ENST00000470614 315 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AC097484.1-201ENST00000471148 389 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 RN7SL346P-201ENST00000491561 294 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 WBP1LP4-201ENST00000505043 344 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.98□□□□□ -1.45
CNGA1P29973 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 AC116353.3-201ENST00000511215 249 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AC091912.1-201ENST00000511351 248 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.98□□□□□ -1.45
CNGA1P29973 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 RNU6-885P-201ENST00000516607 104 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.98□□□□□ -1.45
CNGA1P29973 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.98□□□□□ -1.45
CNGA1P29973 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.98□□□□□ -1.45
CNGA1P29973 MIR4660-201ENST00000583549 74 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AP000769.2-201ENST00000602344 396 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.98□□□□□ -1.45
CNGA1P29973 AL031320.1-201ENST00000604177 357 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.98□□□□□ -1.45
CNGA1P29973 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.98□□□□□ -1.45
CNGA1P29973 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 DBF4P1-201ENST00000412976 1892 ntBASIC5.98□□□□□ -1.45
CNGA1P29973 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.98□□□□□ -1.45
CNGA1P29973 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CNGA1P29973 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CNGA1P29973 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.98□□□□□ -1.45
CNGA1P29973 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CNGA1P29973 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CNGA1P29973 RNU6-582P-201ENST00000362989 107 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CNGA1P29973 SNORD116-23-201ENST00000384645 92 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 U3.28-201ENST00000391249 210 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.97□□□□□ -1.45
CNGA1P29973 AL161449.1-201ENST00000414531 1199 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.97□□□□□ -1.45
CNGA1P29973 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.97□□□□□ -1.45
CNGA1P29973 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.97□□□□□ -1.45
CNGA1P29973 AC138761.5-201ENST00000433967 325 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 NDUFB4P8-201ENST00000435351 367 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.97□□□□□ -1.45
CNGA1P29973 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.97□□□□□ -1.45
CNGA1P29973 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.97□□□□□ -1.45
CNGA1P29973 IGLV2-34-201ENST00000490007 283 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 AC011352.3-201ENST00000505162 593 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC104090.1-201ENST00000506341 1171 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms