Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PTPN4P29074 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN4P29074 RN7SL652P-201ENST00000577769 300 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.47□□□□□ -1.69
PTPN4P29074 AC023762.1-201ENST00000603280 584 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 AC100847.1-201ENST00000611316 481 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN4P29074 AC067931.1-201ENST00000624190 671 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN4P29074 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
PTPN4P29074 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPN4P29074 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PTPN4P29074 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPN4P29074 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN4P29074 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
PTPN4P29074 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTPN4P29074 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTPN4P29074 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PTPN4P29074 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.46□□□□□ -1.69
PTPN4P29074 MAPK10-253ENST00000641010 4072 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPN4P29074 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PTPN4P29074 SNORA70.2-201ENST00000364506 135 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPN4P29074 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
PTPN4P29074 HSPD1P16-201ENST00000402302 394 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PTPN4P29074 AL591848.1-201ENST00000413092 322 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN4P29074 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.46□□□□□ -1.7
PTPN4P29074 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN4P29074 RPS24P8-201ENST00000431490 402 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 YWHAEP5-201ENST00000431545 765 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 ZNF965P-201ENST00000432501 817 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AL031663.1-201ENST00000437445 219 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 ELOCP8-201ENST00000439309 332 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 ELOCP15-201ENST00000442090 332 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN4P29074 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 HMGB1P26-201ENST00000452520 628 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN4P29074 AC006511.1-201ENST00000470614 315 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AC068587.1-201ENST00000483613 781 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN4P29074 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN4P29074 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN4P29074 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN4P29074 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.46□□□□□ -1.7
PTPN4P29074 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN4P29074 SNRPGP1-201ENST00000553864 222 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 PARP1P2-201ENST00000556806 195 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AC023158.1-201ENST00000561632 1025 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN4P29074 AL356218.2-201ENST00000605264 187 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AL355816.1-201ENST00000607951 118 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 CR589904.2-201ENST00000612533 440 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AC006338.2-201ENST00000616864 791 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTPN4P29074 AP006248.2-201ENST00000623309 592 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPN4P29074 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTPN4P29074 AL592148.3-201ENST00000608771 2646 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 AC139713.2-214ENST00000642059 1811 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 AL137100.1-201ENST00000556703 1620 ntBASIC4.46□□□□□ -1.7
PTPN4P29074 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN4P29074 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN4P29074 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTPN4P29074 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN4P29074 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN4P29074 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN4P29074 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTPN4P29074 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN4P29074 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN4P29074 OR10J6P-201ENST00000289731 930 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTPN4P29074 SNORD51.1-201ENST00000365405 77 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 AC068538.1-201ENST00000376856 336 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 RNU1-82P-201ENST00000390851 165 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 AL356967.1-201ENST00000406305 431 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 Z86062.1-201ENST00000406773 777 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN4P29074 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.45□□□□□ -1.7
PTPN4P29074 AC140479.3-201ENST00000418944 1126 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN4P29074 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN4P29074 AL160175.1-201ENST00000428124 247 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 CDY14P-201ENST00000431260 1014 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 CDY12P-201ENST00000440679 1015 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 CDY13P-201ENST00000445813 1015 ntBASIC4.45□□□□□ -1.7
PTPN4P29074 CDY23P-201ENST00000451661 1014 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms