Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL8A1P27658 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.03□□□□□ -1.44
COL8A1P27658 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.03□□□□□ -1.44
COL8A1P27658 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 AC090132.1-201ENST00000524071 1480 ntBASIC6.02□□□□□ -1.44
COL8A1P27658 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
COL8A1P27658 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
COL8A1P27658 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.02□□□□□ -1.44
COL8A1P27658 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.02□□□□□ -1.45
COL8A1P27658 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL8A1P27658 RNU6-1159P-201ENST00000362933 107 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 SNORD116-23-201ENST00000384645 92 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 MIR1-2-201ENST00000384961 85 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 MIR506-201ENST00000384998 124 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 TPMTP2-201ENST00000414372 726 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 AL139396.1-201ENST00000421137 167 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC019097.1-201ENST00000424783 735 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 RPL23AP30-201ENST00000432419 501 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 YWHAZP8-201ENST00000436935 731 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 RPL7P29-201ENST00000437151 728 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC105399.1-202ENST00000447303 205 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 GAPDHP14-201ENST00000450472 937 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 TRGVB-201ENST00000453257 471 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 SNORD127-201ENST00000458892 86 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC126389.1-201ENST00000477436 290 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC116655.1-201ENST00000508324 901 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC012400.1-201ENST00000518452 381 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC087752.2-201ENST00000521219 281 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 AP003385.6-201ENST00000531603 374 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC007068.2-201ENST00000543168 395 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC245052.7-201ENST00000601161 359 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AP004247.3-201ENST00000608682 624 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 AC012409.4-201ENST00000612923 249 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 SNX18P10-201ENST00000625014 519 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COL8A1P27658 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 AL354854.1-201ENST00000455940 1363 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.02□□□□□ -1.45
COL8A1P27658 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.02□□□□□ -1.45
COL8A1P27658 AC005592.1-201ENST00000566527 1640 ntBASIC6.02□□□□□ -1.45
COL8A1P27658 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL8A1P27658 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.02□□□□□ -1.45
COL8A1P27658 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.02□□□□□ -1.45
COL8A1P27658 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL8A1P27658 AP000766.1-201ENST00000561746 4140 ntBASIC6.01□□□□□ -1.45
COL8A1P27658 AL049780.3-201ENST00000624612 1583 ntBASIC6.01□□□□□ -1.45
COL8A1P27658 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL8A1P27658 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.01□□□□□ -1.45
COL8A1P27658 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.01□□□□□ -1.45
COL8A1P27658 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL8A1P27658 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL8A1P27658 MTND5P7-201ENST00000413558 1798 ntBASIC6.01□□□□□ -1.45
COL8A1P27658 AC010615.1-201ENST00000594254 1764 ntBASIC6.01□□□□□ -1.45
COL8A1P27658 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL8A1P27658 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL8A1P27658 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL8A1P27658 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL8A1P27658 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL8A1P27658 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
COL8A1P27658 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms