Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CHMP24386 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP24386 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP24386 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.72□□□□□ -1.65
CHMP24386 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP24386 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
CHMP24386 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.71□□□□□ -1.65
CHMP24386 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.71□□□□□ -1.65
CHMP24386 Z73965.1-201ENST00000623412 2297 ntBASIC4.71□□□□□ -1.65
CHMP24386 AC074029.4-201ENST00000624796 1859 ntBASIC4.71□□□□□ -1.66
CHMP24386 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.71□□□□□ -1.66
CHMP24386 AC005261.4-201ENST00000600047 1385 ntBASIC4.71□□□□□ -1.66
CHMP24386 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHMP24386 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHMP24386 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHMP24386 GLULP6-201ENST00000399502 913 ntBASIC4.71□□□□□ -1.66
CHMP24386 MTCO1P56-201ENST00000401674 224 ntBASIC4.71□□□□□ -1.66
CHMP24386 ZNF602P-201ENST00000405929 924 ntBASIC4.71□□□□□ -1.66
CHMP24386 RNU2-21P-201ENST00000410368 188 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 AC008065.1-201ENST00000428525 348 ntBASIC4.71□□□□□ -1.66
CHMP24386 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.71□□□□□ -1.66
CHMP24386 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP24386 PTMAP6-201ENST00000439110 327 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP24386 AL358794.1-201ENST00000445689 381 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC073850.1-201ENST00000449243 255 ntBASIC4.71□□□□□ -1.66
CHMP24386 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 MRPL42P4-201ENST00000453267 443 ntBASIC4.71□□□□□ -1.66
CHMP24386 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP24386 RPL21P71-201ENST00000465598 459 ntBASIC4.71□□□□□ -1.66
CHMP24386 RPL7AP6-201ENST00000477943 801 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC004453.1-201ENST00000487895 408 ntBASIC4.71□□□□□ -1.66
CHMP24386 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 UBE2V1P12-201ENST00000503954 474 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC097173.1-201ENST00000505862 819 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP24386 RN7SKP66-201ENST00000516681 231 ntBASIC4.71□□□□□ -1.66
CHMP24386 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP24386 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 AC092747.2-201ENST00000545069 983 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC092490.3-201ENST00000545370 572 ntBASIC4.71□□□□□ -1.66
CHMP24386 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.71□□□□□ -1.66
CHMP24386 MIR5708-201ENST00000579723 85 ntBASIC4.71□□□□□ -1.66
CHMP24386 AP005119.2-201ENST00000579735 1105 ntBASIC4.71□□□□□ -1.66
CHMP24386 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 RNF138P2-201ENST00000603490 592 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC233280.2-201ENST00000603917 1070 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC024060.1-201ENST00000607052 494 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC004232.3-201ENST00000622977 525 ntBASIC4.71□□□□□ -1.66
CHMP24386 AC124312.6-202ENST00000623624 418 ntBASIC4.71□□□□□ -1.66
CHMP24386 MIR6715B-201ENST00000637172 77 ntBASIC4.71□□□□□ -1.66
CHMP24386 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHMP24386 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 AC106754.1-201ENST00000562632 1513 ntBASIC4.71□□□□□ -1.66
CHMP24386 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP24386 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CHMP24386 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.7□□□□□ -1.66
CHMP24386 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.7□□□□□ -1.66
CHMP24386 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.7□□□□□ -1.66
CHMP24386 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.7□□□□□ -1.66
CHMP24386 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CHMP24386 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.7□□□□□ -1.66
CHMP24386 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.7□□□□□ -1.66
CHMP24386 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.7□□□□□ -1.66
CHMP24386 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CHMP24386 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP24386 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CHMP24386 AC008280.1-201ENST00000418851 412 ntBASIC4.7□□□□□ -1.66
CHMP24386 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.7□□□□□ -1.66
CHMP24386 RPL36AP10-201ENST00000421785 322 ntBASIC4.7□□□□□ -1.66
CHMP24386 AC004448.2-201ENST00000422360 586 ntBASIC4.7□□□□□ -1.66
CHMP24386 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.7□□□□□ -1.66
CHMP24386 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms