Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BDNFP23560 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
BDNFP23560 AC016716.1-201ENST00000265882 708 ntBASIC5.12□□□□□ -1.59
BDNFP23560 OR4K17-201ENST00000315543 1032 ntBASIC5.12□□□□□ -1.59
BDNFP23560 RNVU1-6-201ENST00000364688 164 ntBASIC5.12□□□□□ -1.59
BDNFP23560 OR51AB1P-201ENST00000429046 620 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.12□□□□□ -1.59
BDNFP23560 FABP7P2-201ENST00000429946 379 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.12□□□□□ -1.59
BDNFP23560 TCEA1P3-201ENST00000443005 880 ntBASIC5.12□□□□□ -1.59
BDNFP23560 Z77249.1-201ENST00000444622 1175 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AL929288.2-201ENST00000446368 407 ntBASIC5.12□□□□□ -1.59
BDNFP23560 MRPL35P2-201ENST00000448009 511 ntBASIC5.12□□□□□ -1.59
BDNFP23560 HMGN3P1-201ENST00000453847 193 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC021660.1-201ENST00000465006 554 ntBASIC5.12□□□□□ -1.59
BDNFP23560 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BDNFP23560 PPM1AP1-201ENST00000502740 1135 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.12□□□□□ -1.59
BDNFP23560 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.12□□□□□ -1.59
BDNFP23560 AC105031.1-201ENST00000518550 476 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC137768.1-201ENST00000549998 553 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC133555.2-201ENST00000550213 292 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.12□□□□□ -1.59
BDNFP23560 AC023824.3-201ENST00000569003 562 ntBASIC5.12□□□□□ -1.59
BDNFP23560 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.12□□□□□ -1.59
BDNFP23560 SNORA74C-1-201ENST00000580726 201 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC022726.1-201ENST00000587475 207 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC098483.2-201ENST00000603158 454 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC007566.2-201ENST00000603642 413 ntBASIC5.12□□□□□ -1.59
BDNFP23560 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.12□□□□□ -1.59
BDNFP23560 AL161616.1-201ENST00000611867 286 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AC006065.5-201ENST00000623427 349 ntBASIC5.12□□□□□ -1.59
BDNFP23560 AL122126.1-201ENST00000546905 1318 ntBASIC5.12□□□□□ -1.59
BDNFP23560 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.12□□□□□ -1.59
BDNFP23560 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BDNFP23560 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BDNFP23560 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.12□□□□□ -1.59
BDNFP23560 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BDNFP23560 AC012618.3-205ENST00000637896 1496 ntBASIC5.12□□□□□ -1.59
BDNFP23560 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
BDNFP23560 ZNF849P-201ENST00000594711 1566 ntBASIC5.12□□□□□ -1.59
BDNFP23560 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.11□□□□□ -1.59
BDNFP23560 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BDNFP23560 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BDNFP23560 RSU1P3-201ENST00000412878 835 ntBASIC5.11□□□□□ -1.59
BDNFP23560 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 AL445183.3-201ENST00000414168 502 ntBASIC5.11□□□□□ -1.59
BDNFP23560 OR4F13P-201ENST00000428478 931 ntBASIC5.11□□□□□ -1.59
BDNFP23560 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.11□□□□□ -1.59
BDNFP23560 RPL23AP33-201ENST00000442301 452 ntBASIC5.11□□□□□ -1.59
BDNFP23560 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 RPL36AP15-201ENST00000444514 266 ntBASIC5.11□□□□□ -1.59
BDNFP23560 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 SNRPGP5-201ENST00000456003 220 ntBASIC5.11□□□□□ -1.59
BDNFP23560 RN7SL517P-201ENST00000462240 305 ntBASIC5.11□□□□□ -1.59
BDNFP23560 AP000893.1-201ENST00000474462 794 ntBASIC5.11□□□□□ -1.59
BDNFP23560 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 Vault.1-201ENST00000516474 102 ntBASIC5.11□□□□□ -1.59
BDNFP23560 HIGD1AP6-201ENST00000521833 279 ntBASIC5.11□□□□□ -1.59
BDNFP23560 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.11□□□□□ -1.59
BDNFP23560 SOX5P1-201ENST00000524155 1127 ntBASIC5.11□□□□□ -1.59
BDNFP23560 OR4R3P-201ENST00000525084 838 ntBASIC5.11□□□□□ -1.59
BDNFP23560 MTCYBP28-201ENST00000566728 1132 ntBASIC5.11□□□□□ -1.59
BDNFP23560 MIR4504-201ENST00000577413 92 ntBASIC5.11□□□□□ -1.59
BDNFP23560 AC127024.5-201ENST00000580085 462 ntBASIC5.11□□□□□ -1.59
BDNFP23560 AC005255.1-201ENST00000593748 216 ntBASIC5.11□□□□□ -1.59
BDNFP23560 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.11□□□□□ -1.59
BDNFP23560 AL121932.1-201ENST00000605542 214 ntBASIC5.11□□□□□ -1.59
BDNFP23560 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.11□□□□□ -1.59
BDNFP23560 MIR6820-201ENST00000611508 62 ntBASIC5.11□□□□□ -1.59
BDNFP23560 BX005214.3-202ENST00000619809 325 ntBASIC5.11□□□□□ -1.59
BDNFP23560 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 LINC01808-202ENST00000641680 1116 ntBASIC5.11□□□□□ -1.59
BDNFP23560 AC009643.2-201ENST00000603543 1448 ntBASIC5.11□□□□□ -1.59
BDNFP23560 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.11□□□□□ -1.59
BDNFP23560 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
BDNFP23560 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
BDNFP23560 AP001642.1-201ENST00000624727 2117 ntBASIC5.11□□□□□ -1.59
BDNFP23560 MAPK10-263ENST00000641052 4307 ntBASIC5.11□□□□□ -1.59
BDNFP23560 TLK1P1-201ENST00000456760 2440 ntBASIC5.11□□□□□ -1.59
BDNFP23560 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
BDNFP23560 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.1□□□□□ -1.59
BDNFP23560 RN7SKP115-201ENST00000363177 317 ntBASIC5.1□□□□□ -1.59
BDNFP23560 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BDNFP23560 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.1□□□□□ -1.59
BDNFP23560 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
BDNFP23560 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BDNFP23560 USP9YP19-201ENST00000412165 485 ntBASIC5.1□□□□□ -1.59
BDNFP23560 DEFB130D-201ENST00000426866 237 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms