Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CKS1BP6-201ENST00000424932 240 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AL359265.2-201ENST00000434367 631 ntBASIC4.56□□□□□ -1.68
CDH3P22223 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH3P22223 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 TPT1P13-201ENST00000449760 499 ntBASIC4.56□□□□□ -1.68
CDH3P22223 RHEBP2-201ENST00000450289 600 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AC239809.1-201ENST00000450470 217 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AC079168.2-201ENST00000453977 416 ntBASIC4.56□□□□□ -1.68
CDH3P22223 RPS20P4-201ENST00000461659 355 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH3P22223 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH3P22223 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.56□□□□□ -1.68
CDH3P22223 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH3P22223 AC093720.1-201ENST00000505681 714 ntBASIC4.56□□□□□ -1.68
CDH3P22223 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH3P22223 AC112518.2-201ENST00000508565 425 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AC010374.2-201ENST00000512933 535 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH3P22223 SNORA31.13-201ENST00000516624 135 ntBASIC4.56□□□□□ -1.68
CDH3P22223 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 AP003355.1-201ENST00000518956 587 ntBASIC4.56□□□□□ -1.68
CDH3P22223 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH3P22223 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH3P22223 ATP5J2P6-201ENST00000565203 266 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 AC234771.5-201ENST00000600161 514 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 AC011458.1-201ENST00000604034 617 ntBASIC4.56□□□□□ -1.68
CDH3P22223 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH3P22223 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH3P22223 AC018926.1-201ENST00000616335 435 ntBASIC4.56□□□□□ -1.68
CDH3P22223 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH3P22223 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH3P22223 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH3P22223 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH3P22223 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CDH3P22223 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH3P22223 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH3P22223 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH3P22223 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 MAPK10-303ENST00000641324 3959 ntBASIC4.55□□□□□ -1.68
CDH3P22223 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 CASC19-206ENST00000641028 1430 ntBASIC4.55□□□□□ -1.68
CDH3P22223 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 PNPT1P2-201ENST00000456768 2050 ntBASIC4.55□□□□□ -1.68
CDH3P22223 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CDH3P22223 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 AC008432.1-201ENST00000615912 1320 ntBASIC4.55□□□□□ -1.68
CDH3P22223 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH3P22223 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 RNU6-481P-201ENST00000384194 107 ntBASIC4.55□□□□□ -1.68
CDH3P22223 MIR92A2-201ENST00000385299 75 ntBASIC4.55□□□□□ -1.68
CDH3P22223 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH3P22223 RPS27AP11-201ENST00000402798 447 ntBASIC4.55□□□□□ -1.68
CDH3P22223 RN7SKP222-201ENST00000410651 315 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AL445183.3-201ENST00000414168 502 ntBASIC4.55□□□□□ -1.68
CDH3P22223 MTND2P9-201ENST00000422293 931 ntBASIC4.55□□□□□ -1.68
CDH3P22223 RGS17P1-201ENST00000423358 553 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AL645608.4-201ENST00000423619 154 ntBASIC4.55□□□□□ -1.68
CDH3P22223 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 DPY19L1P2-201ENST00000426647 915 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 AC011753.3-201ENST00000443436 406 ntBASIC4.55□□□□□ -1.68
CDH3P22223 H2AFZP5-201ENST00000446960 382 ntBASIC4.55□□□□□ -1.68
CDH3P22223 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CDH3P22223 ATP5G1P3-201ENST00000463301 410 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.55□□□□□ -1.68
CDH3P22223 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 CAB39P1-201ENST00000502277 460 ntBASIC4.55□□□□□ -1.68
CDH3P22223 OR5H3P-201ENST00000502817 919 ntBASIC4.55□□□□□ -1.68
CDH3P22223 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH3P22223 OR51K1P-201ENST00000510214 950 ntBASIC4.55□□□□□ -1.68
CDH3P22223 RNU6-1004P-201ENST00000516584 111 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 OR5M2P-201ENST00000529003 936 ntBASIC4.55□□□□□ -1.68
CDH3P22223 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH3P22223 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.55□□□□□ -1.68
CDH3P22223 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms