Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 VTA1P1-201ENST00000414044 866 ntBASIC4.82□□□□□ -1.64
CD58P19256 RAD23BP1-201ENST00000421404 1227 ntBASIC4.82□□□□□ -1.64
CD58P19256 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.82□□□□□ -1.64
CD58P19256 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.82□□□□□ -1.64
CD58P19256 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.82□□□□□ -1.64
CD58P19256 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.82□□□□□ -1.64
CD58P19256 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.82□□□□□ -1.64
CD58P19256 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD58P19256 GTF2IP12-201ENST00000456547 356 ntBASIC4.82□□□□□ -1.64
CD58P19256 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD58P19256 RPS3AP6-201ENST00000484430 795 ntBASIC4.82□□□□□ -1.64
CD58P19256 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.82□□□□□ -1.64
CD58P19256 AC113420.1-201ENST00000507903 571 ntBASIC4.82□□□□□ -1.64
CD58P19256 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 RNA5SP446-201ENST00000515955 82 ntBASIC4.82□□□□□ -1.64
CD58P19256 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.82□□□□□ -1.64
CD58P19256 AC008083.2-201ENST00000546707 476 ntBASIC4.82□□□□□ -1.64
CD58P19256 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.82□□□□□ -1.64
CD58P19256 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 AC016839.1-201ENST00000578162 867 ntBASIC4.82□□□□□ -1.64
CD58P19256 RPL12P25-202ENST00000598100 674 ntBASIC4.82□□□□□ -1.64
CD58P19256 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.82□□□□□ -1.64
CD58P19256 MIR6820-201ENST00000611508 62 ntBASIC4.82□□□□□ -1.64
CD58P19256 AC140725.3-201ENST00000616193 880 ntBASIC4.82□□□□□ -1.64
CD58P19256 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.82□□□□□ -1.64
CD58P19256 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.82□□□□□ -1.64
CD58P19256 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.82□□□□□ -1.64
CD58P19256 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.82□□□□□ -1.64
CD58P19256 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CD58P19256 AC139713.2-210ENST00000641741 992 ntBASIC4.82□□□□□ -1.64
CD58P19256 AC097063.1-201ENST00000426714 1797 ntBASIC4.82□□□□□ -1.64
CD58P19256 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
CD58P19256 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD58P19256 AC120338.1-201ENST00000625074 1541 ntBASIC4.82□□□□□ -1.64
CD58P19256 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.82□□□□□ -1.64
CD58P19256 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD58P19256 AL592148.3-201ENST00000608771 2646 ntBASIC4.81□□□□□ -1.64
CD58P19256 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD58P19256 AC026523.2-201ENST00000625039 7739 ntBASIC4.81□□□□□ -1.64
CD58P19256 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD58P19256 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD58P19256 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD58P19256 CASC19-204ENST00000641001 2055 ntBASIC4.81□□□□□ -1.64
CD58P19256 RAD17P1-201ENST00000418130 2042 ntBASIC4.81□□□□□ -1.64
CD58P19256 RNA5SP151-201ENST00000365632 117 ntBASIC4.81□□□□□ -1.64
CD58P19256 RNU1-63P-201ENST00000383902 164 ntBASIC4.81□□□□□ -1.64
CD58P19256 SNORD65C-201ENST00000390962 71 ntBASIC4.81□□□□□ -1.64
CD58P19256 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.81□□□□□ -1.64
CD58P19256 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.81□□□□□ -1.64
CD58P19256 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.81□□□□□ -1.64
CD58P19256 RPL23AP1-201ENST00000428990 471 ntBASIC4.81□□□□□ -1.64
CD58P19256 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.81□□□□□ -1.64
CD58P19256 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.81□□□□□ -1.64
CD58P19256 RPL23AP43-201ENST00000446445 471 ntBASIC4.81□□□□□ -1.64
CD58P19256 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.81□□□□□ -1.64
CD58P19256 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD58P19256 AC012671.1-201ENST00000451912 203 ntBASIC4.81□□□□□ -1.64
CD58P19256 MTND2P28-201ENST00000457540 1044 ntBASIC4.81□□□□□ -1.64
CD58P19256 RPS27AP17-201ENST00000463344 455 ntBASIC4.81□□□□□ -1.64
CD58P19256 RN7SL459P-201ENST00000481078 302 ntBASIC4.81□□□□□ -1.64
CD58P19256 DEFB109F-201ENST00000491870 277 ntBASIC4.81□□□□□ -1.64
CD58P19256 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.81□□□□□ -1.64
CD58P19256 AK3P4-201ENST00000504283 583 ntBASIC4.81□□□□□ -1.64
CD58P19256 RNA5SP228-201ENST00000516232 133 ntBASIC4.81□□□□□ -1.64
CD58P19256 Y_RNA.717-201ENST00000517106 92 ntBASIC4.81□□□□□ -1.64
CD58P19256 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.81□□□□□ -1.64
CD58P19256 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.81□□□□□ -1.64
CD58P19256 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.81□□□□□ -1.64
CD58P19256 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.81□□□□□ -1.64
CD58P19256 OR10V3P-201ENST00000525712 725 ntBASIC4.81□□□□□ -1.64
CD58P19256 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.81□□□□□ -1.64
CD58P19256 AL132857.1-201ENST00000555180 708 ntBASIC4.81□□□□□ -1.64
CD58P19256 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.81□□□□□ -1.64
CD58P19256 NPM1P47-201ENST00000560843 856 ntBASIC4.81□□□□□ -1.64
CD58P19256 AC084783.1-201ENST00000565846 910 ntBASIC4.81□□□□□ -1.64
CD58P19256 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.81□□□□□ -1.64
CD58P19256 MIR548Y-201ENST00000582739 110 ntBASIC4.81□□□□□ -1.64
CD58P19256 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.81□□□□□ -1.64
CD58P19256 AC090181.2-201ENST00000602975 672 ntBASIC4.81□□□□□ -1.64
CD58P19256 AC008782.1-201ENST00000603386 430 ntBASIC4.81□□□□□ -1.64
CD58P19256 AL450336.1-201ENST00000605180 586 ntBASIC4.81□□□□□ -1.64
CD58P19256 AC096586.1-201ENST00000610267 561 ntBASIC4.81□□□□□ -1.64
CD58P19256 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.81□□□□□ -1.64
CD58P19256 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.81□□□□□ -1.64
CD58P19256 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CD58P19256 AC091905.2-201ENST00000623143 306 ntBASIC4.81□□□□□ -1.64
CD58P19256 AC024023.1-201ENST00000624530 922 ntBASIC4.81□□□□□ -1.64
CD58P19256 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD58P19256 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.81□□□□□ -1.64
CD58P19256 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD58P19256 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.81□□□□□ -1.64
CD58P19256 LINC00622-201ENST00000562811 1570 ntBASIC4.81□□□□□ -1.64
CD58P19256 ZNF849P-201ENST00000594711 1566 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms