Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL160175.1-201ENST00000428124 247 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 FTH1P6-201ENST00000430768 320 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UBCP0CG48 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 AP002345.1-201ENST00000456493 928 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 AC092691.2-201ENST00000461787 803 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 AC117394.1-201ENST00000477323 567 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.81□□□□□ -1.8
UBCP0CG48 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.81□□□□□ -1.8
UBCP0CG48 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 IGHV3-32-201ENST00000519182 355 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.81□□□□□ -1.8
UBCP0CG48 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 AC016180.1-201ENST00000567945 403 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 AC115621.1-201ENST00000604653 858 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 MIR432-201ENST00000606207 94 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.81□□□□□ -1.8
UBCP0CG48 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.81□□□□□ -1.8
UBCP0CG48 MIR6891-201ENST00000618788 93 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UBCP0CG48 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 AC025125.1-201ENST00000624743 1922 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.81□□□□□ -1.8
UBCP0CG48 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.81□□□□□ -1.8
UBCP0CG48 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBCP0CG48 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBCP0CG48 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
UBCP0CG48 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 AC138393.1-206ENST00000540997 1886 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBCP0CG48 XIAPP3-201ENST00000312918 795 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 IGKV7-3-201ENST00000357453 298 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.8□□□□□ -1.8
UBCP0CG48 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
UBCP0CG48 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
UBCP0CG48 MIR659-201ENST00000384963 97 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 MIR1178-201ENST00000408396 91 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 RN7SKP177-201ENST00000410567 355 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.8□□□□□ -1.8
UBCP0CG48 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.8□□□□□ -1.8
UBCP0CG48 AL512504.1-201ENST00000415494 778 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 BX510359.3-201ENST00000422168 306 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.8□□□□□ -1.8
UBCP0CG48 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.8□□□□□ -1.8
UBCP0CG48 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.8□□□□□ -1.8
UBCP0CG48 AC008072.1-201ENST00000434254 824 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 VN1R54P-201ENST00000435210 1049 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 PSMD10P3-201ENST00000437000 448 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 MORF4L1P4-201ENST00000450245 976 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 RPS3AP53-201ENST00000454716 778 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 AC018635.1-201ENST00000468292 1030 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 MTND3P6-201ENST00000485242 339 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 RPL30P11-201ENST00000495304 339 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 AC017037.1-201ENST00000508460 471 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 OR5H4P-201ENST00000510851 923 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 HMGB1P47-201ENST00000511281 589 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.8□□□□□ -1.8
UBCP0CG48 AP000827.1-201ENST00000527814 258 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 AP001781.1-201ENST00000530977 207 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.8□□□□□ -1.8
UBCP0CG48 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.8□□□□□ -1.8
UBCP0CG48 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.8□□□□□ -1.8
UBCP0CG48 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 AC115085.1-201ENST00000588924 229 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 OR7E18P-201ENST00000592589 702 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 MIR6862-1-201ENST00000613016 70 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 MIR6862-2-201ENST00000614755 70 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 FP325313.1-201ENST00000638228 703 ntBASIC3.8□□□□□ -1.8
UBCP0CG48 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBCP0CG48 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.8□□□□□ -1.8
UBCP0CG48 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
UBCP0CG48 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBCP0CG48 AC131971.1-201ENST00000332881 1482 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 AC008725.1-201ENST00000605123 2263 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.79□□□□□ -1.8
UBCP0CG48 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
UBCP0CG48 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 MAPK10-253ENST00000641010 4072 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms