Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.41□□□□□ -1.7
RETP07949 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.41□□□□□ -1.7
RETP07949 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RETP07949 RPL23AP43-201ENST00000446445 471 ntBASIC4.41□□□□□ -1.7
RETP07949 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.41□□□□□ -1.7
RETP07949 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.41□□□□□ -1.7
RETP07949 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.41□□□□□ -1.7
RETP07949 VN1R105P-201ENST00000486595 910 ntBASIC4.41□□□□□ -1.7
RETP07949 TPT1P3-201ENST00000492841 512 ntBASIC4.41□□□□□ -1.7
RETP07949 AC113398.2-201ENST00000507630 558 ntBASIC4.41□□□□□ -1.7
RETP07949 AC008958.1-201ENST00000511047 682 ntBASIC4.41□□□□□ -1.7
RETP07949 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.41□□□□□ -1.7
RETP07949 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.41□□□□□ -1.7
RETP07949 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.41□□□□□ -1.7
RETP07949 AC008759.1-201ENST00000589783 983 ntBASIC4.41□□□□□ -1.7
RETP07949 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.41□□□□□ -1.7
RETP07949 AC006116.5-201ENST00000591936 559 ntBASIC4.41□□□□□ -1.7
RETP07949 VN1R81P-201ENST00000602085 372 ntBASIC4.41□□□□□ -1.7
RETP07949 AC020634.1-201ENST00000608701 549 ntBASIC4.41□□□□□ -1.7
RETP07949 AC007546.1-201ENST00000619452 559 ntBASIC4.41□□□□□ -1.7
RETP07949 AL158163.1-201ENST00000603915 1649 ntBASIC4.41□□□□□ -1.7
RETP07949 AL161912.2-201ENST00000565707 3007 ntBASIC4.41□□□□□ -1.7
RETP07949 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
RETP07949 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RETP07949 AC093311.1-201ENST00000506586 2021 ntBASIC4.41□□□□□ -1.7
RETP07949 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RETP07949 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RETP07949 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RETP07949 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RETP07949 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RETP07949 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RETP07949 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RETP07949 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RETP07949 AC010329.2-201ENST00000595195 2737 ntBASIC4.4□□□□□ -1.7
RETP07949 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RETP07949 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.4□□□□□ -1.71
RETP07949 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 RPL21P91-201ENST00000429231 479 ntBASIC4.4□□□□□ -1.71
RETP07949 MRPL50P1-201ENST00000431951 384 ntBASIC4.4□□□□□ -1.71
RETP07949 RPS6P12-201ENST00000432491 726 ntBASIC4.4□□□□□ -1.71
RETP07949 BTF3P10-201ENST00000433415 495 ntBASIC4.4□□□□□ -1.71
RETP07949 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AL138787.1-202ENST00000437804 898 ntBASIC4.4□□□□□ -1.71
RETP07949 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.4□□□□□ -1.71
RETP07949 PSMC1P13-201ENST00000458195 985 ntBASIC4.4□□□□□ -1.71
RETP07949 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC010469.1-201ENST00000463864 576 ntBASIC4.4□□□□□ -1.71
RETP07949 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RETP07949 AC012158.1-204ENST00000483430 465 ntBASIC4.4□□□□□ -1.71
RETP07949 RPS6P4-201ENST00000494693 758 ntBASIC4.4□□□□□ -1.71
RETP07949 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.4□□□□□ -1.71
RETP07949 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.4□□□□□ -1.71
RETP07949 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC100770.1-201ENST00000532310 322 ntBASIC4.4□□□□□ -1.71
RETP07949 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.4□□□□□ -1.71
RETP07949 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.4□□□□□ -1.71
RETP07949 AL121834.1-201ENST00000572284 509 ntBASIC4.4□□□□□ -1.71
RETP07949 RN7SL600P-201ENST00000581811 299 ntBASIC4.4□□□□□ -1.71
RETP07949 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.4□□□□□ -1.71
RETP07949 BNIP3P11-201ENST00000603878 563 ntBASIC4.4□□□□□ -1.71
RETP07949 AL713998.2-201ENST00000604538 1198 ntBASIC4.4□□□□□ -1.71
RETP07949 AL161756.2-201ENST00000604597 246 ntBASIC4.4□□□□□ -1.71
RETP07949 RNU4-89P-201ENST00000607443 133 ntBASIC4.4□□□□□ -1.71
RETP07949 AC069200.1-201ENST00000609511 323 ntBASIC4.4□□□□□ -1.71
RETP07949 AL353726.1-201ENST00000614041 1000 ntBASIC4.4□□□□□ -1.71
RETP07949 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.4□□□□□ -1.71
RETP07949 AC099669.2-201ENST00000616549 437 ntBASIC4.4□□□□□ -1.71
RETP07949 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.4□□□□□ -1.71
RETP07949 MIR7154-201ENST00000620673 73 ntBASIC4.4□□□□□ -1.71
RETP07949 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RETP07949 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RETP07949 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.71
RETP07949 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.4□□□□□ -1.71
RETP07949 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RETP07949 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RETP07949 AL391684.1-202ENST00000641293 1636 ntBASIC4.39□□□□□ -1.71
RETP07949 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
RETP07949 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.39□□□□□ -1.71
RETP07949 MIR7-3-201ENST00000384898 110 ntBASIC4.39□□□□□ -1.71
RETP07949 MIR3065-201ENST00000390137 79 ntBASIC4.39□□□□□ -1.71
RETP07949 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.39□□□□□ -1.71
RETP07949 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.39□□□□□ -1.71
RETP07949 SNRPFP1-201ENST00000414761 252 ntBASIC4.39□□□□□ -1.71
RETP07949 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RETP07949 AC091390.3-201ENST00000426478 338 ntBASIC4.39□□□□□ -1.71
RETP07949 YME1L1P1-201ENST00000429435 297 ntBASIC4.39□□□□□ -1.71
RETP07949 RAB9AP5-201ENST00000437794 597 ntBASIC4.39□□□□□ -1.71
RETP07949 RAB9AP2-201ENST00000443911 597 ntBASIC4.39□□□□□ -1.71
RETP07949 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.39□□□□□ -1.71
RETP07949 RPL6P5-201ENST00000445678 828 ntBASIC4.39□□□□□ -1.71
RETP07949 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.39□□□□□ -1.71
RETP07949 AL133547.1-201ENST00000448546 220 ntBASIC4.39□□□□□ -1.71
RETP07949 EIF2S2P4-201ENST00000461070 984 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms