Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RNF2P1-201ENST00000442955 1010 ntBASIC4.96□□□□□ -1.62
RB1P06400 RPL7P33-201ENST00000444159 742 ntBASIC4.96□□□□□ -1.62
RB1P06400 ARL5AP2-201ENST00000444698 533 ntBASIC4.96□□□□□ -1.62
RB1P06400 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.96□□□□□ -1.62
RB1P06400 AC044797.1-201ENST00000445744 679 ntBASIC4.96□□□□□ -1.62
RB1P06400 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.96□□□□□ -1.62
RB1P06400 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.96□□□□□ -1.62
RB1P06400 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.96□□□□□ -1.62
RB1P06400 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.96□□□□□ -1.62
RB1P06400 AC099560.2-201ENST00000457554 255 ntBASIC4.96□□□□□ -1.62
RB1P06400 RPL7P19-201ENST00000469948 618 ntBASIC4.96□□□□□ -1.62
RB1P06400 RPL21P126-201ENST00000470049 478 ntBASIC4.96□□□□□ -1.62
RB1P06400 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.96□□□□□ -1.62
RB1P06400 AC073073.1-201ENST00000493920 463 ntBASIC4.96□□□□□ -1.62
RB1P06400 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.96□□□□□ -1.62
RB1P06400 IGLVIV-65-201ENST00000517313 360 ntBASIC4.96□□□□□ -1.62
RB1P06400 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.96□□□□□ -1.62
RB1P06400 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.96□□□□□ -1.62
RB1P06400 POLR2KP1-201ENST00000553226 168 ntBASIC4.96□□□□□ -1.62
RB1P06400 AC106785.1-201ENST00000565935 262 ntBASIC4.96□□□□□ -1.62
RB1P06400 MIR3936-201ENST00000584304 110 ntBASIC4.96□□□□□ -1.62
RB1P06400 ELOCP34-201ENST00000604436 327 ntBASIC4.96□□□□□ -1.62
RB1P06400 AC006213.4-201ENST00000616184 634 ntBASIC4.96□□□□□ -1.62
RB1P06400 FRG1HP-204ENST00000617940 757 ntBASIC4.96□□□□□ -1.62
RB1P06400 AP000648.2-201ENST00000624182 404 ntBASIC4.96□□□□□ -1.62
RB1P06400 AP000843.1-201ENST00000624880 701 ntBASIC4.96□□□□□ -1.62
RB1P06400 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.96□□□□□ -1.62
RB1P06400 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RB1P06400 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RB1P06400 AC093535.2-201ENST00000624769 2326 ntBASIC4.96□□□□□ -1.62
RB1P06400 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.96□□□□□ -1.62
RB1P06400 RNF6P1-201ENST00000444889 1784 ntBASIC4.96□□□□□ -1.62
RB1P06400 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RB1P06400 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RB1P06400 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.95□□□□□ -1.62
RB1P06400 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.95□□□□□ -1.62
RB1P06400 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.95□□□□□ -1.62
RB1P06400 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 RNA5SP27-201ENST00000363839 119 ntBASIC4.95□□□□□ -1.62
RB1P06400 MIR134-201ENST00000385258 73 ntBASIC4.95□□□□□ -1.62
RB1P06400 AC093719.1-202ENST00000392735 373 ntBASIC4.95□□□□□ -1.62
RB1P06400 AC025750.1-201ENST00000399891 379 ntBASIC4.95□□□□□ -1.62
RB1P06400 HMGB3P19-201ENST00000403971 560 ntBASIC4.95□□□□□ -1.62
RB1P06400 AL024507.1-201ENST00000412741 274 ntBASIC4.95□□□□□ -1.62
RB1P06400 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 AC073310.1-201ENST00000423226 1033 ntBASIC4.95□□□□□ -1.62
RB1P06400 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.95□□□□□ -1.62
RB1P06400 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 HSFY7P-201ENST00000432672 318 ntBASIC4.95□□□□□ -1.62
RB1P06400 HSFY8P-201ENST00000437934 318 ntBASIC4.95□□□□□ -1.62
RB1P06400 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.95□□□□□ -1.62
RB1P06400 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 HSFY5P-201ENST00000453726 309 ntBASIC4.95□□□□□ -1.62
RB1P06400 AC093166.2-201ENST00000455969 1017 ntBASIC4.95□□□□□ -1.62
RB1P06400 SCARNA10-201ENST00000459255 330 ntBASIC4.95□□□□□ -1.62
RB1P06400 AC091167.1-201ENST00000492017 396 ntBASIC4.95□□□□□ -1.62
RB1P06400 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 MRPL49P2-201ENST00000521066 465 ntBASIC4.95□□□□□ -1.62
RB1P06400 OR8G5-201ENST00000524943 1041 ntBASIC4.95□□□□□ -1.62
RB1P06400 CYCSP29-201ENST00000533731 318 ntBASIC4.95□□□□□ -1.62
RB1P06400 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 AC025884.1-201ENST00000556034 378 ntBASIC4.95□□□□□ -1.62
RB1P06400 AL121594.4-201ENST00000556211 1196 ntBASIC4.95□□□□□ -1.62
RB1P06400 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.95□□□□□ -1.62
RB1P06400 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 RNF138P2-201ENST00000603490 592 ntBASIC4.95□□□□□ -1.62
RB1P06400 ARF4P1-201ENST00000605447 541 ntBASIC4.95□□□□□ -1.62
RB1P06400 AL008729.2-201ENST00000606393 473 ntBASIC4.95□□□□□ -1.62
RB1P06400 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RB1P06400 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.95□□□□□ -1.62
RB1P06400 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.95□□□□□ -1.62
RB1P06400 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.95□□□□□ -1.62
RB1P06400 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RB1P06400 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.95□□□□□ -1.62
RB1P06400 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RB1P06400 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RB1P06400 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.94□□□□□ -1.62
RB1P06400 AC006042.3-201ENST00000454684 1469 ntBASIC4.94□□□□□ -1.62
RB1P06400 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RB1P06400 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.94□□□□□ -1.62
RB1P06400 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.94□□□□□ -1.62
RB1P06400 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RB1P06400 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 RNU1-94P-201ENST00000362627 173 ntBASIC4.94□□□□□ -1.62
RB1P06400 RNU6-317P-201ENST00000384031 107 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms