Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 AL450472.3-201ENST00000615578 367 ntBASIC2.37□□□□□ -2.03
APOBP04114 AC244258.1-201ENST00000637553 1071 ntBASIC2.37□□□□□ -2.03
APOBP04114 AC104623.2-202ENST00000623477 4002 ntBASIC2.37□□□□□ -2.03
APOBP04114 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 AL353743.1-202ENST00000431724 1695 ntBASIC2.37□□□□□ -2.03
APOBP04114 AL359643.1-201ENST00000404109 423 ntBASIC2.37□□□□□ -2.03
APOBP04114 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.37□□□□□ -2.03
APOBP04114 AC008065.1-201ENST00000428525 348 ntBASIC2.37□□□□□ -2.03
APOBP04114 RPS26P2-201ENST00000440331 348 ntBASIC2.37□□□□□ -2.03
APOBP04114 CYCSP28-201ENST00000534284 321 ntBASIC2.37□□□□□ -2.03
APOBP04114 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.37□□□□□ -2.03
APOBP04114 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.37□□□□□ -2.03
APOBP04114 AL606834.2-201ENST00000602954 668 ntBASIC2.37□□□□□ -2.03
APOBP04114 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 RNF19BPX-201ENST00000426224 625 ntBASIC2.37□□□□□ -2.03
APOBP04114 DPY19L1P2-201ENST00000426647 915 ntBASIC2.37□□□□□ -2.03
APOBP04114 NPM1P25-201ENST00000429734 854 ntBASIC2.37□□□□□ -2.03
APOBP04114 AL365440.1-201ENST00000436135 2167 ntBASIC2.37□□□□□ -2.03
APOBP04114 AP001992.1-205ENST00000462248 379 ntBASIC2.37□□□□□ -2.03
APOBP04114 RNA5SP303-201ENST00000516192 130 ntBASIC2.37□□□□□ -2.03
APOBP04114 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.37□□□□□ -2.03
APOBP04114 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 RN7SKP186-201ENST00000365371 303 ntBASIC2.37□□□□□ -2.03
APOBP04114 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
APOBP04114 UBE2V1P2-201ENST00000397758 440 ntBASIC2.37□□□□□ -2.03
APOBP04114 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.37□□□□□ -2.03
APOBP04114 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.37□□□□□ -2.03
APOBP04114 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.37□□□□□ -2.03
APOBP04114 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC2.37□□□□□ -2.03
APOBP04114 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
APOBP04114 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC2.37□□□□□ -2.03
APOBP04114 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 MAPK10-303ENST00000641324 3959 ntBASIC2.37□□□□□ -2.03
APOBP04114 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
APOBP04114 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
APOBP04114 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
APOBP04114 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 AL158071.1-201ENST00000430315 461 ntBASIC2.36□□□□□ -2.03
APOBP04114 MIR6715A-201ENST00000615929 79 ntBASIC2.36□□□□□ -2.03
APOBP04114 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC2.36□□□□□ -2.03
APOBP04114 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.36□□□□□ -2.03
APOBP04114 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.36□□□□□ -2.03
APOBP04114 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.36□□□□□ -2.03
APOBP04114 HMGB3P16-201ENST00000508037 287 ntBASIC2.36□□□□□ -2.03
APOBP04114 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
APOBP04114 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
APOBP04114 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
APOBP04114 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
APOBP04114 MRPL35P4-201ENST00000453682 566 ntBASIC2.36□□□□□ -2.03
APOBP04114 AC090602.1-201ENST00000469695 252 ntBASIC2.36□□□□□ -2.03
APOBP04114 HMGN1P11-201ENST00000508668 303 ntBASIC2.36□□□□□ -2.03
APOBP04114 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC2.36□□□□□ -2.03
APOBP04114 RPL23AP87-202ENST00000573039 466 ntBASIC2.36□□□□□ -2.03
APOBP04114 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC2.36□□□□□ -2.03
APOBP04114 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC2.36□□□□□ -2.03
APOBP04114 SAMMSON-213ENST00000641336 1521 ntBASIC2.36□□□□□ -2.03
APOBP04114 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOBP04114 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBP04114 RN7SL504P-201ENST00000494496 287 ntBASIC2.35□□□□□ -2.03
APOBP04114 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.35□□□□□ -2.03
APOBP04114 AL121603.1-201ENST00000553815 142 ntBASIC2.35□□□□□ -2.03
APOBP04114 AC091544.4-201ENST00000555268 342 ntBASIC2.35□□□□□ -2.03
APOBP04114 AC010591.1-201ENST00000603941 649 ntBASIC2.35□□□□□ -2.03
APOBP04114 AC243654.2-201ENST00000612843 443 ntBASIC2.35□□□□□ -2.03
APOBP04114 ATP5A1P2-202ENST00000616464 443 ntBASIC2.35□□□□□ -2.03
APOBP04114 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms