Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC073343.1-201ENST00000328239 651 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 RNU6-1062P-201ENST00000383908 107 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 PRELID1P2-201ENST00000407805 396 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 RPS7P14-201ENST00000426405 583 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 SDAD1P3-201ENST00000427380 333 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 FTH1P20-201ENST00000434913 548 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 HSPE1P22-201ENST00000456856 327 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 RNU6-789P-201ENST00000517105 102 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC090510.2-201ENST00000617465 629 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 AC244517.12-201ENST00000623581 663 ntBASIC7.28□□□□□ -1.24
ALDH1A1P00352 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
ALDH1A1P00352 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ALDH1A1P00352 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
ALDH1A1P00352 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 MAPK10-261ENST00000641050 3109 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 SUGT1P1-201ENST00000379514 476 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 AL390316.1-201ENST00000406279 553 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 GAPDHP42-201ENST00000406848 981 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 RNA5SP156-201ENST00000410250 110 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 DPY19L1P2-201ENST00000426647 915 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 AC002486.2-201ENST00000447806 590 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 RN7SL515P-201ENST00000463999 297 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 AC010547.6-201ENST00000571789 193 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 AP005119.1-201ENST00000580956 292 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 AC010327.2-201ENST00000587647 488 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 AL513218.1-201ENST00000606527 391 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 AC078899.5-201ENST00000612475 178 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 AC008115.3-201ENST00000614874 549 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 AC079597.1-201ENST00000624306 508 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 AC099654.6-201ENST00000636487 512 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 MTCO1P14-201ENST00000441695 1559 ntBASIC7.27□□□□□ -1.25
ALDH1A1P00352 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ALDH1A1P00352 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.27□□□□□ -1.25
ALDH1A1P00352 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms