Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC006463.2-201ENST00000473326 348 ntBASIC4.41□□□□□ -1.7
SSX4O60224 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX4O60224 AC091959.2-201ENST00000477363 321 ntBASIC4.41□□□□□ -1.7
SSX4O60224 AC073522.1-201ENST00000483312 377 ntBASIC4.41□□□□□ -1.7
SSX4O60224 HMGN2P25-201ENST00000486956 268 ntBASIC4.41□□□□□ -1.7
SSX4O60224 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 AC105233.1-201ENST00000498840 781 ntBASIC4.41□□□□□ -1.7
SSX4O60224 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 AC091860.1-201ENST00000505723 432 ntBASIC4.41□□□□□ -1.7
SSX4O60224 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 AC110760.3-202ENST00000515177 371 ntBASIC4.41□□□□□ -1.7
SSX4O60224 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX4O60224 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 AL049838.1-201ENST00000563647 981 ntBASIC4.41□□□□□ -1.7
SSX4O60224 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 VN1R88P-201ENST00000596787 292 ntBASIC4.41□□□□□ -1.7
SSX4O60224 SNX18P1Y-201ENST00000616231 511 ntBASIC4.41□□□□□ -1.7
SSX4O60224 AC091046.2-201ENST00000620775 665 ntBASIC4.41□□□□□ -1.7
SSX4O60224 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX4O60224 AC015908.5-201ENST00000623289 343 ntBASIC4.41□□□□□ -1.7
SSX4O60224 AC093535.2-201ENST00000624769 2326 ntBASIC4.41□□□□□ -1.7
SSX4O60224 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX4O60224 AL445437.1-201ENST00000623157 3087 ntBASIC4.41□□□□□ -1.7
SSX4O60224 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SSX4O60224 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
SSX4O60224 AC022031.1-201ENST00000585985 2593 ntBASIC4.41□□□□□ -1.7
SSX4O60224 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
SSX4O60224 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SSX4O60224 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.7
SSX4O60224 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.4□□□□□ -1.7
SSX4O60224 AC092162.3-201ENST00000624511 1624 ntBASIC4.4□□□□□ -1.7
SSX4O60224 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSX4O60224 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SSX4O60224 RNA5SP28-201ENST00000363841 119 ntBASIC4.4□□□□□ -1.71
SSX4O60224 RNU6-178P-201ENST00000384631 104 ntBASIC4.4□□□□□ -1.71
SSX4O60224 ZNF602P-201ENST00000405929 924 ntBASIC4.4□□□□□ -1.71
SSX4O60224 BTF3P8-201ENST00000414577 526 ntBASIC4.4□□□□□ -1.71
SSX4O60224 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX4O60224 OSTCP5-201ENST00000425293 453 ntBASIC4.4□□□□□ -1.71
SSX4O60224 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX4O60224 MTCYBP15-201ENST00000433123 1127 ntBASIC4.4□□□□□ -1.71
SSX4O60224 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX4O60224 PTGES3P1-201ENST00000439531 483 ntBASIC4.4□□□□□ -1.71
SSX4O60224 CEACAMP9-201ENST00000442990 513 ntBASIC4.4□□□□□ -1.71
SSX4O60224 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX4O60224 DUXAP8-207ENST00000456786 622 ntBASIC4.4□□□□□ -1.71
SSX4O60224 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SSX4O60224 RPL7AP28-201ENST00000464513 571 ntBASIC4.4□□□□□ -1.71
SSX4O60224 RPS29P22-201ENST00000472363 168 ntBASIC4.4□□□□□ -1.71
SSX4O60224 RN7SL817P-201ENST00000480777 288 ntBASIC4.4□□□□□ -1.71
SSX4O60224 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX4O60224 IGJP1-201ENST00000522682 475 ntBASIC4.4□□□□□ -1.71
SSX4O60224 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.4□□□□□ -1.71
SSX4O60224 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX4O60224 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.4□□□□□ -1.71
SSX4O60224 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX4O60224 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX4O60224 AC008814.1-201ENST00000603797 406 ntBASIC4.4□□□□□ -1.71
SSX4O60224 AC017076.1-201ENST00000607613 578 ntBASIC4.4□□□□□ -1.71
SSX4O60224 AC097505.1-201ENST00000610199 565 ntBASIC4.4□□□□□ -1.71
SSX4O60224 DUXAP10-204ENST00000612052 616 ntBASIC4.4□□□□□ -1.71
SSX4O60224 VN1R74P-201ENST00000613259 503 ntBASIC4.4□□□□□ -1.71
SSX4O60224 AC104985.3-201ENST00000623479 597 ntBASIC4.4□□□□□ -1.71
SSX4O60224 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX4O60224 AC046144.1-201ENST00000478559 1853 ntBASIC4.4□□□□□ -1.71
SSX4O60224 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SSX4O60224 SMG1P6-201ENST00000532337 2930 ntBASIC4.4□□□□□ -1.71
SSX4O60224 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX4O60224 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX4O60224 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSX4O60224 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSX4O60224 AC091046.3-201ENST00000631455 1574 ntBASIC4.4□□□□□ -1.71
SSX4O60224 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX4O60224 AC111188.2-201ENST00000529697 1387 ntBASIC4.4□□□□□ -1.71
SSX4O60224 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 CASC19-206ENST00000641028 1430 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC134882.1-201ENST00000603738 1676 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC009229.4-201ENST00000623854 1947 ntBASIC4.39□□□□□ -1.71
SSX4O60224 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX4O60224 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX4O60224 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSX4O60224 OR52B1P-201ENST00000316506 909 ntBASIC4.39□□□□□ -1.71
SSX4O60224 U3.3-201ENST00000362986 216 ntBASIC4.39□□□□□ -1.71
SSX4O60224 RNU1-83P-201ENST00000363426 164 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC019155.1-201ENST00000382242 574 ntBASIC4.39□□□□□ -1.71
SSX4O60224 MIR195-201ENST00000385194 87 ntBASIC4.39□□□□□ -1.71
SSX4O60224 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSX4O60224 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.39□□□□□ -1.71
SSX4O60224 EIF4A1P3-201ENST00000411521 244 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms