Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 Y_RNA.436-201ENST00000384097 102 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 RGS17P1-201ENST00000423358 553 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 OR5M12P-201ENST00000423388 929 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 AL158073.1-201ENST00000426848 1104 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 ARF4P4-201ENST00000439608 520 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 MTCO2P7-201ENST00000446518 666 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 BTF3P6-201ENST00000448054 499 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.84□□□□□ -1.63
SMAD6O43541 CYCSP20-201ENST00000473154 315 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 RPL23AP72-201ENST00000492447 435 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 PGBD4P4-201ENST00000509673 613 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC004923.2-201ENST00000529649 369 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.84□□□□□ -1.63
SMAD6O43541 DUXAP6-201ENST00000553858 601 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC010735.1-201ENST00000567305 1026 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 CCDC58P3-201ENST00000590792 430 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC068790.7-201ENST00000602347 528 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AC104785.1-201ENST00000603220 588 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AL158042.1-201ENST00000605338 460 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AC012414.7-202ENST00000622705 1090 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.84□□□□□ -1.63
SMAD6O43541 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.84□□□□□ -1.63
SMAD6O43541 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.84□□□□□ -1.64
SMAD6O43541 AL451142.2-201ENST00000429076 2090 ntBASIC4.84□□□□□ -1.64
SMAD6O43541 AL731532.2-201ENST00000623542 1953 ntBASIC4.84□□□□□ -1.64
SMAD6O43541 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
SMAD6O43541 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SMAD6O43541 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SMAD6O43541 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 RNU6-207P-201ENST00000384137 107 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 RNU6-398P-201ENST00000384143 109 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SMAD6O43541 Z86062.1-201ENST00000406773 777 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 RN7SKP106-201ENST00000410832 272 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 RPL6P29-201ENST00000414863 865 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 VN1R42P-201ENST00000424651 344 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 RPL23AP4-201ENST00000427757 463 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC093422.3-201ENST00000428506 305 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AL589823.1-201ENST00000429577 183 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 MTND4P6-201ENST00000438297 472 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 CEACAMP9-201ENST00000442990 513 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC011753.3-201ENST00000443436 406 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SMAD6O43541 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 AL513533.1-201ENST00000453728 415 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC079168.2-201ENST00000453977 416 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC010326.1-201ENST00000462726 602 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.83□□□□□ -1.64
SMAD6O43541 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.83□□□□□ -1.64
SMAD6O43541 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 ENPP7P9-201ENST00000514456 627 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.83□□□□□ -1.64
SMAD6O43541 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.83□□□□□ -1.64
SMAD6O43541 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.83□□□□□ -1.64
SMAD6O43541 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.83□□□□□ -1.64
SMAD6O43541 AC073091.2-201ENST00000603205 907 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms