Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR6868-201ENST00000611215 58 ntBASIC6.95□□□□□ -1.3
CUX2O14529 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CUX2O14529 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.95□□□□□ -1.3
CUX2O14529 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUX2O14529 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CUX2O14529 ZNF826P-207ENST00000622273 1910 ntBASIC6.94□□□□□ -1.3
CUX2O14529 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CUX2O14529 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
CUX2O14529 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.94□□□□□ -1.3
CUX2O14529 RNF19BPX-201ENST00000426224 625 ntBASIC6.94□□□□□ -1.3
CUX2O14529 DPY19L1P2-201ENST00000426647 915 ntBASIC6.94□□□□□ -1.3
CUX2O14529 PTP4A1P3-201ENST00000433661 420 ntBASIC6.94□□□□□ -1.3
CUX2O14529 RPS4XP4-201ENST00000443195 763 ntBASIC6.94□□□□□ -1.3
CUX2O14529 FCF1P7-201ENST00000451185 558 ntBASIC6.94□□□□□ -1.3
CUX2O14529 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.94□□□□□ -1.3
CUX2O14529 APOOP2-201ENST00000461561 539 ntBASIC6.94□□□□□ -1.3
CUX2O14529 RPL23AP37-201ENST00000479658 549 ntBASIC6.94□□□□□ -1.3
CUX2O14529 HIGD1AP3-201ENST00000515857 278 ntBASIC6.94□□□□□ -1.3
CUX2O14529 AC110743.1-201ENST00000584870 478 ntBASIC6.94□□□□□ -1.3
CUX2O14529 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
CUX2O14529 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.94□□□□□ -1.3
CUX2O14529 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CUX2O14529 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CUX2O14529 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CUX2O14529 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CUX2O14529 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CUX2O14529 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
CUX2O14529 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CUX2O14529 U1.1-201ENST00000384101 164 ntBASIC6.93□□□□□ -1.3
CUX2O14529 AC092641.1-201ENST00000440229 772 ntBASIC6.93□□□□□ -1.3
CUX2O14529 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.93□□□□□ -1.3
CUX2O14529 AC006011.1-201ENST00000442758 349 ntBASIC6.93□□□□□ -1.3
CUX2O14529 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.93□□□□□ -1.3
CUX2O14529 RPS29P19-201ENST00000479709 171 ntBASIC6.93□□□□□ -1.3
CUX2O14529 STMN1P2-201ENST00000508435 439 ntBASIC6.93□□□□□ -1.3
CUX2O14529 AC034105.3-201ENST00000565294 442 ntBASIC6.93□□□□□ -1.3
CUX2O14529 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.93□□□□□ -1.3
CUX2O14529 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.93□□□□□ -1.3
CUX2O14529 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.93□□□□□ -1.3
CUX2O14529 AC092435.3-201ENST00000565538 3654 ntBASIC6.93□□□□□ -1.3
CUX2O14529 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CUX2O14529 SNORA60-201ENST00000362396 134 ntBASIC6.92□□□□□ -1.3
CUX2O14529 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.92□□□□□ -1.3
CUX2O14529 RN7SL271P-201ENST00000487601 295 ntBASIC6.92□□□□□ -1.3
CUX2O14529 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.92□□□□□ -1.3
CUX2O14529 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.92□□□□□ -1.3
CUX2O14529 Vault.1-201ENST00000516474 102 ntBASIC6.92□□□□□ -1.3
CUX2O14529 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.92□□□□□ -1.3
CUX2O14529 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.92□□□□□ -1.3
CUX2O14529 AC008966.2-201ENST00000606157 453 ntBASIC6.92□□□□□ -1.3
CUX2O14529 AC016542.2-201ENST00000624201 619 ntBASIC6.92□□□□□ -1.3
CUX2O14529 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUX2O14529 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CUX2O14529 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CUX2O14529 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUX2O14529 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUX2O14529 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUX2O14529 OR10J6P-201ENST00000289731 930 ntBASIC6.92□□□□□ -1.3
CUX2O14529 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CUX2O14529 AC093719.1-202ENST00000392735 373 ntBASIC6.92□□□□□ -1.3
CUX2O14529 AL121878.1-201ENST00000418638 859 ntBASIC6.92□□□□□ -1.3
CUX2O14529 AC037198.2-201ENST00000478845 733 ntBASIC6.92□□□□□ -1.3
CUX2O14529 AC020893.1-201ENST00000502452 580 ntBASIC6.92□□□□□ -1.3
CUX2O14529 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.92□□□□□ -1.3
CUX2O14529 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.92□□□□□ -1.3
CUX2O14529 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.92□□□□□ -1.3
CUX2O14529 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.92□□□□□ -1.3
CUX2O14529 AL157762.1-201ENST00000619612 415 ntBASIC6.92□□□□□ -1.3
CUX2O14529 AF001550.2-201ENST00000636643 217 ntBASIC6.92□□□□□ -1.3
CUX2O14529 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUX2O14529 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUX2O14529 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CUX2O14529 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CUX2O14529 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.91□□□□□ -1.3
CUX2O14529 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUX2O14529 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CUX2O14529 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CUX2O14529 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CUX2O14529 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CUX2O14529 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.91□□□□□ -1.3
CUX2O14529 AL591419.1-201ENST00000427423 339 ntBASIC6.91□□□□□ -1.3
CUX2O14529 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.91□□□□□ -1.3
CUX2O14529 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CUX2O14529 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.91□□□□□ -1.3
CUX2O14529 AC114878.2-201ENST00000604863 1251 ntBASIC6.91□□□□□ -1.3
CUX2O14529 AC244258.1-201ENST00000637553 1071 ntBASIC6.91□□□□□ -1.3
CUX2O14529 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.91□□□□□ -1.3
CUX2O14529 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUX2O14529 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUX2O14529 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUX2O14529 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUX2O14529 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
CUX2O14529 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUX2O14529 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUX2O14529 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUX2O14529 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.9□□□□□ -1.31
CUX2O14529 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.9□□□□□ -1.31
CUX2O14529 ATP5A1P2-201ENST00000412323 255 ntBASIC6.9□□□□□ -1.31
CUX2O14529 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.9□□□□□ -1.31
CUX2O14529 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms