Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC103792.1-201ENST00000603591 919 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 Z82195.1-201ENST00000604558 398 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC015849.2-201ENST00000605738 409 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC012557.1-201ENST00000607115 611 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AP002360.3-201ENST00000607673 710 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
PDLIM1O00151 AC091905.2-201ENST00000623143 306 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AP001784.1-201ENST00000624107 428 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.28□□□□□ -1.72
PDLIM1O00151 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.28□□□□□ -1.72
PDLIM1O00151 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
PDLIM1O00151 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
PDLIM1O00151 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM1O00151 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PDLIM1O00151 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
PDLIM1O00151 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC006971.1-201ENST00000407916 4486 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 SDAD1P1-202ENST00000524156 2051 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PDLIM1O00151 U3.30-201ENST00000391308 210 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM1O00151 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 RN7SKP222-201ENST00000410651 315 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 RPL23AP26-201ENST00000412728 464 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC004074.1-201ENST00000421810 1063 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AC073335.1-201ENST00000427776 363 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 MTATP6P11-201ENST00000428071 670 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AL360081.1-201ENST00000428299 555 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 MTCO3P21-201ENST00000430791 643 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 ARL4AP4-201ENST00000434170 518 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AC008072.1-201ENST00000434254 824 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 MTND4P15-201ENST00000437913 1033 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM1O00151 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM1O00151 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM1O00151 RNU6-1218P-201ENST00000458990 108 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AC063943.1-201ENST00000465434 453 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AC090142.1-201ENST00000465776 462 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 RPL7L1P8-201ENST00000469911 741 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AC083982.1-201ENST00000485679 344 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 IGLV2-34-201ENST00000490007 283 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 SCARNA22-201ENST00000503991 125 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 RNU6-1231P-201ENST00000517185 103 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.27□□□□□ -1.73
PDLIM1O00151 OR8K2P-201ENST00000524645 927 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC133555.2-201ENST00000550213 292 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC021483.2-201ENST00000567415 758 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 MIR4480-201ENST00000582492 71 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC022726.1-201ENST00000587475 207 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM1O00151 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC010201.1-201ENST00000605051 540 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM1O00151 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM1O00151 AL391834.1-201ENST00000609609 560 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 Mico1.1-201ENST00000611698 204 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM1O00151 AL391684.1-202ENST00000641293 1636 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 AL359715.4-201ENST00000606629 1436 ntBASIC4.27□□□□□ -1.73
PDLIM1O00151 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM1O00151 ZFRP1-201ENST00000457579 2970 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM1O00151 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM1O00151 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC016769.2-201ENST00000414815 475 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM1O00151 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM1O00151 USP9YP9-201ENST00000429406 715 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.26□□□□□ -1.73
PDLIM1O00151 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC007000.2-201ENST00000442564 487 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM1O00151 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM1O00151 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC234781.3-201ENST00000452540 973 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms