Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC090543.2-201ENST00000483963 348 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC004057.1-201ENST00000485827 348 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC188H7C350 HMGB1P23-201ENST00000518743 568 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 SOX5P1-201ENST00000524155 1127 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AC063949.1-201ENST00000552900 865 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC188H7C350 ATP5F1P7-201ENST00000567330 760 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC106734.1-201ENST00000568646 663 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AC011477.5-201ENST00000586571 259 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC125494.3-201ENST00000602759 455 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AL139395.1-201ENST00000603662 160 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC090948.2-201ENST00000607363 564 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC018926.1-201ENST00000616335 435 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC188H7C350 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC188H7C350 U6.107-201ENST00000637108 79 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC188H7C350 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC188H7C350 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CCDC188H7C350 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC188H7C350 INTS6P1-201ENST00000504674 2530 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC188H7C350 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC188H7C350 AL590763.1-201ENST00000398297 1545 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 AL353743.4-201ENST00000422653 1547 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC188H7C350 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC188H7C350 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC188H7C350 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC188H7C350 SNORA63.3-201ENST00000362682 132 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 AP002784.2-201ENST00000397300 549 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 MIR1911-201ENST00000410783 80 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC188H7C350 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC188H7C350 ELOCP18-201ENST00000434209 337 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC188H7C350 ELOCP8-201ENST00000439309 332 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 MTND6P18-201ENST00000439477 513 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 ELOCP15-201ENST00000442090 332 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 EEF1A1P1-201ENST00000447052 739 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC188H7C350 RPL23AP71-201ENST00000470966 469 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 CYCSP20-201ENST00000473154 315 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 MTND4LP2-201ENST00000502312 285 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC188H7C350 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC188H7C350 RNA5SP34-201ENST00000516887 130 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC021006.3-201ENST00000530771 192 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 HAUS8P1-201ENST00000549005 542 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC188H7C350 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC090515.3-201ENST00000560431 315 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 BGLT3-201ENST00000564523 994 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CCDC188H7C350 AC112503.2-201ENST00000609005 552 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 AC009318.3-201ENST00000616916 503 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 STMN1P1-201ENST00000617809 440 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 MIR6730-201ENST00000622213 67 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 MIR6719-201ENST00000622428 87 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 AC024595.1-201ENST00000623088 387 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC188H7C350 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC188H7C350 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC188H7C350 SEC63P2-201ENST00000503863 1939 ntBASIC4.62□□□□□ -1.67
CCDC188H7C350 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC188H7C350 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC188H7C350 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC188H7C350 USP9YP4-201ENST00000424401 1745 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC188H7C350 AC021146.4-201ENST00000309229 279 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 SNORD56.4-201ENST00000363883 71 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 MIR765-201ENST00000390226 114 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 MIR937-201ENST00000401271 86 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AL645733.1-201ENST00000402250 217 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC188H7C350 RNA5SP113-201ENST00000410486 84 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 HMGB3P31-201ENST00000413333 595 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC188H7C350 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC188H7C350 ATG4AP1-201ENST00000416893 538 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC188H7C350 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 RBMY1KP-201ENST00000423480 476 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms