Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 Y_RNA.197-201ENST00000364004 102 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RN7SKP191-201ENST00000364713 306 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RN7SKP47-201ENST00000365347 328 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RNU4-20P-201ENST00000365601 151 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RN7SKP91-201ENST00000410852 288 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RPSAP60-201ENST00000415403 880 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 PMCHL1-202ENST00000423102 261 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RPS3AP52-201ENST00000435639 297 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 SNRPEP4-201ENST00000435815 279 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RPL23AP74-201ENST00000437246 471 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC005017.1-201ENST00000482002 490 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 HSPD1P15-201ENST00000505573 1122 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 FAM206BP-201ENST00000510179 541 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 IGKV2D-38-201ENST00000518423 240 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC022634.1-201ENST00000520765 532 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 MRPS16P1-201ENST00000523462 412 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 FXNP1-201ENST00000555153 337 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC110588.1-201ENST00000559699 137 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC015818.6-201ENST00000584274 634 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 MIR3149-201ENST00000584629 83 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC087575.1-201ENST00000585087 229 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC011500.1-201ENST00000601963 469 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 CYP2C61P-201ENST00000604072 290 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 APOOP1-201ENST00000604695 592 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AL359091.2-201ENST00000609303 556 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 uc_338.15-201ENST00000615470 191 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC119674.1-207ENST00000641355 633 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AC012618.3-205ENST00000637896 1496 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 AP002800.1-201ENST00000624982 2225 ntBASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
PCDHB11Q9Y5F2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 RAD17P2-201ENST00000451754 1977 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 Y_RNA.31-201ENST00000362574 102 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 RNA5SP394-201ENST00000364216 119 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 RNU4-48P-201ENST00000365559 182 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ARF4P3-201ENST00000397387 509 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AL353133.1-201ENST00000407695 401 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC000089.1-201ENST00000424559 801 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC006512.1-201ENST00000468816 291 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 RN7SL379P-201ENST00000479912 293 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 RPL23AP41-201ENST00000484754 458 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 MTND4LP22-201ENST00000508209 276 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms