Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 OR7K1P-201ENST00000546439 926 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC015720.2-201ENST00000567709 334 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AP005262.1-201ENST00000582646 997 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AL606834.2-201ENST00000602954 668 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC068276.1-201ENST00000605793 379 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC012360.2-201ENST00000609349 391 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC116651.1-201ENST00000609724 556 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC106028.5-201ENST00000610332 395 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 uc_338.7-201ENST00000621834 124 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC005609.4-201ENST00000625071 447 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 SNORA17.5-201ENST00000630429 132 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC093849.1-201ENST00000563631 2209 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 MTND5P23-201ENST00000430812 1655 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHB4Q9Y5E5 CASC19-260ENST00000641828 2001 ntBASIC5.84□□□□□ -1.48
PCDHB4Q9Y5E5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHB4Q9Y5E5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC245100.2-201ENST00000454544 1679 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RNA5SP319-201ENST00000362768 119 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 Y_RNA.248-201ENST00000364501 109 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RN7SKP81-201ENST00000365603 331 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RNY3P14-201ENST00000384309 102 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RNU6-1263P-201ENST00000384601 106 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 GAPDHP49-201ENST00000421421 961 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RPL23AP4-201ENST00000427757 463 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AL050321.1-201ENST00000432363 400 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC012075.1-201ENST00000436549 580 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RPL12P11-201ENST00000439970 501 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 COX6CP18-201ENST00000448769 222 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC239798.3-201ENST00000454459 408 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 SETP20-201ENST00000457046 852 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RN7SL51P-201ENST00000468230 285 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 SCARNA16.4-201ENST00000516956 187 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AL109618.2-201ENST00000605527 211 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 RNA5SP439-201ENST00000617595 124 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC005840.5-201ENST00000619166 599 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AL356266.1-201ENST00000623311 483 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC099654.12-201ENST00000639868 649 ntBASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB4Q9Y5E5 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 AC004520.1-201ENST00000608362 1413 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 AL353796.1-201ENST00000561542 3241 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 MAPK10-338ENST00000641647 3362 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 RN7SKP124-201ENST00000364730 341 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 MIR16-1-201ENST00000385271 89 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 RNA5SP498-201ENST00000411342 120 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 RPL23AP39-201ENST00000415533 405 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 GNG5P5-201ENST00000420444 220 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 FNDC3CP-201ENST00000420795 1155 ntBASIC5.82□□□□□ -1.48
PCDHB4Q9Y5E5 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms