Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC068446.3-201ENST00000555285 382 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC110743.1-201ENST00000584870 478 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 RPL7P50-201ENST00000600588 727 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AP002360.3-201ENST00000607673 710 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AL133243.1-201ENST00000614487 366 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AL445493.3-201ENST00000619568 477 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 MIR7641-1-201ENST00000627518 61 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 LINC01808-202ENST00000641680 1116 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AL592437.2-201ENST00000421655 2434 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 OR52B1P-201ENST00000316506 909 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC011155.1-201ENST00000316512 456 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 RNU6-650P-201ENST00000365658 111 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 SNORA40.4-201ENST00000390971 128 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 VDAC1P9-201ENST00000412766 841 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 MTCO3P4-201ENST00000419236 787 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 DNAJC19P7-201ENST00000428811 344 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC068287.1-201ENST00000430283 295 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC097499.1-201ENST00000444277 208 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 MTND2P8-201ENST00000450555 1025 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 RPL7AP28-201ENST00000464513 571 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 MTND6P6-201ENST00000478031 263 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 RPL23AP73-201ENST00000492507 471 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC008628.1-201ENST00000508663 265 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 RNU6-1102P-201ENST00000516149 96 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 SNORA76.2-201ENST00000517095 137 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 RAB9BP1-201ENST00000519581 626 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 CIR1P1-201ENST00000524055 1133 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 POLR2KP1-201ENST00000553226 168 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC079148.1-201ENST00000565944 819 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC069061.3-201ENST00000582254 823 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 MIR5096-201ENST00000583713 70 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 ZNF92P2-201ENST00000600543 1059 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC020634.1-201ENST00000608701 549 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC015726.3-201ENST00000624501 418 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC116563.2-201ENST00000624751 535 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 CFTRP2-201ENST00000634304 199 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 FRG1DP-201ENST00000635586 771 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
ATG4BQ9Y4P1 AC092435.4-201ENST00000623012 4159 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms