Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 DUXAP6-201ENST00000553858 601 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 UBE2FP2-201ENST00000566646 462 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC109446.2-201ENST00000567872 497 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 PIGPP4-201ENST00000584447 307 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC105254.2-201ENST00000603636 436 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC109454.4-201ENST00000623411 649 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC006210.2-201ENST00000367074 1545 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL513185.3-201ENST00000433335 1300 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 MTND4P10-201ENST00000446199 1363 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC000374.1-201ENST00000434698 1745 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 METTL21EP-201ENST00000298105 713 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 OR5H2-201ENST00000355273 945 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 Y_RNA.169-201ENST00000363745 96 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 RNVU1-6-201ENST00000364688 164 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AL359643.1-201ENST00000404109 423 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AL356131.1-201ENST00000405826 414 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AL008987.1-201ENST00000415528 237 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 HIGD1AP12-201ENST00000427832 281 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC007559.1-201ENST00000428736 355 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 GTF3AP5-201ENST00000442645 697 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC068135.1-201ENST00000446164 246 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 EXTL2P1-201ENST00000446218 416 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 OR52J1P-201ENST00000450596 932 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC107015.1-201ENST00000466902 747 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 RPL21P6-201ENST00000479171 504 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 BET1P1-201ENST00000482276 359 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 MYL12BP2-201ENST00000503948 512 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 HPRT1P2-201ENST00000505250 544 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 BNIP3P1-201ENST00000547295 580 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC095057.3-201ENST00000567102 1157 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC234771.5-201ENST00000600161 514 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 Z99497.2-201ENST00000603634 310 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC108738.1-201ENST00000603703 237 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC011626.1-201ENST00000604710 562 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC009237.15-201ENST00000610252 501 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC009090.3-201ENST00000616553 565 ntBASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX2IPQ9Y2D8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 RNA5SP223-201ENST00000365174 120 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 Z75741.2-201ENST00000417272 1167 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 ELOCP9-201ENST00000418624 239 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms