Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RNU1-140P-201ENST00000365040 165 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AL513175.1-201ENST00000431492 780 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 SETP5-201ENST00000437270 562 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 CYCSP35-201ENST00000451978 304 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 snoU13.23-201ENST00000458863 104 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 MIR5186-201ENST00000577504 120 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 MIR1179-201ENST00000408703 91 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 PSMC1P13-201ENST00000458195 985 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC110743.1-201ENST00000584870 478 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 OR5AC4P-202ENST00000642086 985 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 RNA5SP51-201ENST00000364750 119 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AL451139.1-201ENST00000434718 346 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 NANOGNBP1-201ENST00000448444 480 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC021074.2-201ENST00000468434 172 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 RPL23AP87-202ENST00000573039 466 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 Y_RNA.458-201ENST00000384240 102 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 Z93242.1-201ENST00000427102 353 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 RN7SKP82-201ENST00000516786 223 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC022884.2-201ENST00000578535 580 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 MIR4319-201ENST00000577285 85 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC006363.1-201ENST00000603806 463 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 RPL23AP69-201ENST00000431134 458 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC125257.1-201ENST00000560400 2930 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 AC092435.3-201ENST00000565538 3654 ntBASIC1.62□□□□□ -2.15
MACF1Q9UPN3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MACF1Q9UPN3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms