Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RPS20P14-201ENST00000412545 360 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC013404.1-201ENST00000413068 249 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AL450992.3-201ENST00000413192 568 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 MTND4P24-201ENST00000424002 397 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 RPL12P34-201ENST00000424532 479 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 NPM1P24-201ENST00000428039 894 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 RPL7P4-203ENST00000430239 730 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 PRELID3BP10-201ENST00000431957 584 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 UBE2V1P3-201ENST00000439651 417 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 HMGB1P16-201ENST00000447155 540 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 VN1R32P-201ENST00000452234 905 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 RPS27AP17-201ENST00000463344 455 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 RN7SL610P-201ENST00000463845 291 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 RPL23AP12-201ENST00000467573 473 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 OR52A4P-202ENST00000481634 799 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 CKS1BP1-201ENST00000555221 240 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AP003117.1-201ENST00000602771 554 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC005084.1-201ENST00000605160 304 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC110741.2-201ENST00000605278 268 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC025175.1-201ENST00000606482 759 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC139769.3-201ENST00000618383 175 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC103858.2-201ENST00000621471 543 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 AC116563.2-201ENST00000624751 535 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 CYP1D1P-201ENST00000416662 1433 ntBASIC3.92□□□□□ -1.78
COPS3Q9UNS2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
COPS3Q9UNS2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 FAM35DP-201ENST00000323387 2712 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RN7SKP44-201ENST00000363602 316 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AL353692.2-201ENST00000407054 335 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RN7SKP278-201ENST00000410504 342 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AL158073.1-201ENST00000426848 1104 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AL160175.1-201ENST00000428124 247 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 ZFAND6P1-201ENST00000434138 605 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RPS20P1-201ENST00000434853 354 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RPL36AP15-201ENST00000444514 266 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RPL31P44-201ENST00000447680 377 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 RPS27AP16-201ENST00000492222 470 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 IFITM8P-201ENST00000522529 394 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 DEFB109D-201ENST00000529497 240 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AL049870.4-201ENST00000555741 486 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC027176.2-201ENST00000559166 746 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC125257.1-201ENST00000560400 2930 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 CYP4A43P-201ENST00000568156 121 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 MIR4737-201ENST00000583979 81 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC005242.1-201ENST00000585658 438 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 HMGB1P50-201ENST00000605814 607 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC133644.2-201ENST00000608142 540 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 LINC01808-202ENST00000641680 1116 ntBASIC3.91□□□□□ -1.78
COPS3Q9UNS2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPS3Q9UNS2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COPS3Q9UNS2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.9□□□□□ -1.78
COPS3Q9UNS2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.78
COPS3Q9UNS2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COPS3Q9UNS2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
COPS3Q9UNS2 SNORA62.2-201ENST00000364672 152 ntBASIC3.9□□□□□ -1.79
COPS3Q9UNS2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.9□□□□□ -1.79
COPS3Q9UNS2 SDHCP2-201ENST00000398565 501 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms