Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 BX119904.1-201ENST00000432026 348 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 GSTA7P-201ENST00000438425 448 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC006116.5-201ENST00000591936 559 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC010615.3-201ENST00000597319 394 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 MIR6820-201ENST00000611508 62 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AP005212.4-201ENST00000614206 710 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 OR11H5P-202ENST00000641612 1325 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 CASC19-284ENST00000642142 1868 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC016588.2-201ENST00000632484 3021 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 MIR383-201ENST00000362257 73 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 RPL18P10-201ENST00000425606 538 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC011742.1-201ENST00000431448 434 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 RPL7P1-201ENST00000468161 747 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 RPL7P9-201ENST00000468715 747 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 UQCRHP4-201ENST00000471686 272 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 RPL31P61-201ENST00000496160 376 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 RPS27AP13-201ENST00000498403 237 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC139783.2-201ENST00000504847 1145 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC093840.1-201ENST00000511599 336 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC009643.1-201ENST00000532030 391 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 NPM1P35-201ENST00000533043 868 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 CR383656.6-201ENST00000550518 394 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 MIR5684-201ENST00000585074 65 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 MIR3138-201ENST00000585238 82 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AC090246.1-201ENST00000616499 426 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 MIR8059-201ENST00000620427 81 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AL773545.4-201ENST00000637262 310 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 AL513478.4-201ENST00000641636 310 ntBASIC4.1□□□□□ -1.75
TREX1Q9NSU2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TREX1Q9NSU2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AL133412.1-201ENST00000380194 2992 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC068254.2-201ENST00000623938 3577 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 RNU6-225P-201ENST00000384613 103 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 RPS6P12-201ENST00000432491 726 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 TPTE2P3-201ENST00000441562 1189 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms