Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
SND1-IT1Q9HBX3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SND1-IT1Q9HBX3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SND1-IT1Q9HBX3 AL137100.1-201ENST00000556703 1620 ntBASIC2.96□□□□□ -1.94
SND1-IT1Q9HBX3 AC009501.3-201ENST00000605001 1352 ntBASIC2.96□□□□□ -1.94
SND1-IT1Q9HBX3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.96□□□□□ -1.94
SND1-IT1Q9HBX3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SND1-IT1Q9HBX3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SND1-IT1Q9HBX3 AC108467.2-201ENST00000617640 1597 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 MAPK10-373ENST00000641983 6772 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 XIAPP3-201ENST00000312918 795 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 RN7SKP95-201ENST00000362860 303 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 VTA1P1-201ENST00000414044 866 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC140479.3-201ENST00000418944 1126 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 CR848007.2-201ENST00000424918 787 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 CNOT7P2-201ENST00000441051 832 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC108463.1-201ENST00000450258 347 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 SNORD108-201ENST00000459332 71 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 CABYRP1-201ENST00000465493 1045 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 RPL23AP2-201ENST00000471227 466 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC093270.2-201ENST00000486157 792 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 IGLV2-34-201ENST00000490007 283 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 RPL7P51-201ENST00000490532 749 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC109462.1-201ENST00000491087 368 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 RPL36AP41-201ENST00000493820 306 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 SCARNA22-201ENST00000503991 125 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 VWA8P1-201ENST00000510889 176 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 GCSHP4-201ENST00000538792 439 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC074029.1-201ENST00000552531 1044 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC090751.1-201ENST00000566966 267 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 BPIFA4P-203ENST00000603168 689 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 KATNBL1P1-201ENST00000605192 748 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 MIR432-201ENST00000606207 94 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 Z98200.1-201ENST00000607298 470 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AC016717.3-201ENST00000624730 554 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 SPATA31D2P-201ENST00000429999 4388 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 ERCC6-202ENST00000374127 1782 ntBASIC2.95□□□□□ -1.94
SND1-IT1Q9HBX3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 AC105074.1-201ENST00000623380 3095 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 SNORA71.2-201ENST00000364941 134 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 RN7SKP177-201ENST00000410567 355 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 XKRYP4-201ENST00000414395 483 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 RAD23BP1-201ENST00000421404 1227 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 GSTA7P-201ENST00000438425 448 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 OR1H1P-201ENST00000448731 937 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 XKRYP5-201ENST00000449659 483 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 PPIAP3-201ENST00000450588 505 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 snoU13.20-201ENST00000459180 104 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 SCARNA10-201ENST00000459255 330 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 RN7SL174P-201ENST00000475578 289 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 BX284632.1-201ENST00000478218 541 ntBASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.94□□□□□ -1.94
SND1-IT1Q9HBX3 AC012170.1-201ENST00000495139 359 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms