Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 AC095038.2-201ENST00000621464 1070 ntBASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 AC097460.3-201ENST00000623099 442 ntBASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 OR2L1P-202ENST00000641567 1023 ntBASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 A2MP1-204ENST00000566278 4130 ntBASIC4.4□□□□□ -1.71
VIPAS39Q9H9C1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 HSPA8P1-201ENST00000425843 1833 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RN7SKP95-201ENST00000362860 303 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 SNORA71.2-201ENST00000364941 134 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 OR6K3-202ENST00000368146 996 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RNA5SP332-201ENST00000391063 115 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 HMGN2P8-201ENST00000391458 268 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RNU2-17P-201ENST00000410290 190 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RNU4-74P-201ENST00000411280 161 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 NPM1P4-201ENST00000414095 812 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 TATDN1P1-201ENST00000414123 891 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 MTCO3P4-201ENST00000419236 787 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC048351.1-201ENST00000420064 602 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 MTCO1P52-201ENST00000433928 531 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RPL23AP93-201ENST00000440847 484 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 FAR2P1-206ENST00000449736 709 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RPS27AP17-201ENST00000463344 455 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RN7SL174P-201ENST00000475578 289 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RN7SL812P-201ENST00000493791 279 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 RNU2-30P-201ENST00000516209 141 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 SNORA31.13-201ENST00000516624 135 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 IGLVIV-64-201ENST00000518581 301 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 IGKV3D-34-201ENST00000522638 302 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 CIR1P1-201ENST00000524055 1133 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC011472.4-201ENST00000615848 491 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 uc_338.9-201ENST00000617424 182 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 AC007546.1-201ENST00000619452 559 ntBASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VIPAS39Q9H9C1 MAPK10-373ENST00000641983 6772 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 RNU6-225P-201ENST00000384613 103 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 RNU6-796P-201ENST00000391086 107 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 ATP5F1P6-201ENST00000402768 767 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 ATF1P1-201ENST00000406040 927 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 RNA5SP498-201ENST00000411342 120 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 LINC01881-201ENST00000416103 412 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 EIF1P3-201ENST00000423841 334 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 MTCO2P1-201ENST00000424648 477 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC115285.1-201ENST00000424879 736 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 RPS12P10-201ENST00000427031 377 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC007559.1-201ENST00000428736 355 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 NRBF2P3-201ENST00000432731 865 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 YWHAZP2-201ENST00000440317 728 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC112498.1-201ENST00000444401 332 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 OR1H1P-201ENST00000448731 937 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 HMGB1P26-201ENST00000452520 628 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 RPS20P4-201ENST00000461659 355 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC005798.1-201ENST00000513715 387 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms