Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC083809.1-201ENST00000615051 472 ntBASIC4.77□□□□□ -1.65
CCSER1Q9C0I3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCSER1Q9C0I3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCSER1Q9C0I3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 RNA5SP52-201ENST00000362448 134 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 RNU6-532P-201ENST00000384318 107 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 RNA5SP36-201ENST00000410197 133 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 GAPDHP49-201ENST00000421421 961 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 RPL23AP89-201ENST00000439324 255 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 CBX1P1-201ENST00000440184 427 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 ELOCP10-201ENST00000440624 327 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 AC073587.1-201ENST00000447093 876 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 RNU7-27P-201ENST00000459281 62 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 PPIAP21-201ENST00000464473 501 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 HMGB3P14-201ENST00000494195 599 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 HPRT1P1-201ENST00000509498 657 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 IFITM8P-201ENST00000522529 394 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 OR5M7P-201ENST00000526140 972 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 ELOCP34-201ENST00000604436 327 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 AL023881.1-201ENST00000621088 301 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 AC008785.1-201ENST00000624475 456 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 AC087190.4-201ENST00000574616 8334 ntBASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCSER1Q9C0I3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 RNU1-132P-201ENST00000364300 164 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC048351.1-201ENST00000420064 602 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 RPS12P5-201ENST00000423449 371 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AL158073.1-201ENST00000426848 1104 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 C4BPAP2-201ENST00000428434 478 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AP002345.1-201ENST00000456493 928 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 RNU6-1218P-201ENST00000458990 108 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 RPS20P4-201ENST00000461659 355 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 PARP4P3-201ENST00000510265 317 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC108157.1-201ENST00000510511 539 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC008958.1-201ENST00000511047 682 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC093840.1-201ENST00000511599 336 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 RNA5SP519-201ENST00000516480 119 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC136624.4-201ENST00000573044 370 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 SS18L2P2-201ENST00000583960 235 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 MIR6798-201ENST00000612887 67 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AC016911.1-201ENST00000613297 452 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 MIR7702-201ENST00000621931 59 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 BMS1P21-201ENST00000634565 365 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 OR5AC4P-202ENST00000642086 985 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 CCT8P1-201ENST00000413611 1657 ntBASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.75□□□□□ -1.65
CCSER1Q9C0I3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 AL359715.4-201ENST00000606629 1436 ntBASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 MIR421-201ENST00000365696 85 ntBASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 RNU6-152P-201ENST00000384037 107 ntBASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 RNU6-603P-201ENST00000411403 107 ntBASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 RPS3AP54-201ENST00000435535 734 ntBASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 RPL12P46-201ENST00000436610 195 ntBASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 AC245517.2-201ENST00000442890 346 ntBASIC4.74□□□□□ -1.65
CCSER1Q9C0I3 TPT1P12-201ENST00000448968 492 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms