Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MT-RNR2-201ENST00000387347 1559 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AP000432.2-201ENST00000624164 2048 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 CDR1-202ENST00000625883 1485 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC092724.1-201ENST00000624623 3397 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RBMY1HP-201ENST00000382759 1389 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.1-201ENST00000352915 104 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.86-201ENST00000363020 111 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RNU6-1066P-201ENST00000363573 105 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.431-201ENST00000384086 102 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RNU6-767P-201ENST00000384132 107 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 SNORA70.9-201ENST00000384370 135 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 SNRPEP2-201ENST00000397592 279 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 SNORA11C-201ENST00000408532 129 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC116036.1-201ENST00000412199 367 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 BX295541.1-201ENST00000417774 250 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 SAR1AP4-201ENST00000429225 591 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AL512605.1-202ENST00000441919 381 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 USP9YP15-201ENST00000442391 422 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AL022237.1-201ENST00000446663 358 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC104306.1-201ENST00000449702 371 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC108463.1-201ENST00000450258 347 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 FABP3P2-201ENST00000453169 399 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 MTCO3P20-201ENST00000454926 688 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC010307.1-201ENST00000467206 836 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC114967.1-201ENST00000504890 259 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC025458.1-201ENST00000506046 166 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RNU6-1334P-201ENST00000516032 105 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RNY4P37-201ENST00000516225 96 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 PSMA3P-201ENST00000555485 635 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 MIR5697-201ENST00000578045 78 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC090236.2-201ENST00000587933 1101 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AP001429.1-201ENST00000602568 530 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC087283.1-201ENST00000604029 1074 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC112191.3-201ENST00000604371 277 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC141002.1-201ENST00000607025 279 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AL096712.1-201ENST00000614561 159 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC008121.3-201ENST00000618726 433 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC138305.3-201ENST00000624988 240 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC116667.2-201ENST00000641075 823 ntBASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP3Q9BWW4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 FARSBP1-201ENST00000435808 1778 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 HDAC1P2-201ENST00000453661 1398 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC138915.3-201ENST00000562908 1389 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms