Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AL136520.1-201ENST00000600311 1322 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 RNU6-1176P-201ENST00000390955 107 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 SNORD66.1-201ENST00000391230 76 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 RPS20P14-201ENST00000412545 360 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC004074.1-201ENST00000421810 1063 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 SEC63P1-201ENST00000425785 1258 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 RBMY2QP-201ENST00000429799 1147 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AL391987.1-201ENST00000441025 200 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC114495.1-201ENST00000441274 436 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 EEF1B2P5-201ENST00000444820 548 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 FABP3P2-201ENST00000453169 399 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 MTND2P6-201ENST00000455337 1030 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC005532.2-201ENST00000467154 373 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 LARP7P4-201ENST00000481075 878 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 RNU6-1102P-201ENST00000516149 96 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 RNA5SP92-201ENST00000516437 110 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 NOP56P3-201ENST00000549457 385 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC011445.2-201ENST00000599274 173 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AL512782.1-201ENST00000603093 364 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 MTCO2P22-201ENST00000603246 681 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC105105.5-201ENST00000622635 1294 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AP006248.2-201ENST00000623309 592 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC092159.4-201ENST00000624944 550 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC006065.6-201ENST00000625201 545 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 OR5AC4P-202ENST00000642086 985 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 MFSD8-242ENST00000641690 4199 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 SPATA2P1-201ENST00000431223 2055 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 AC090017.1-201ENST00000548612 1779 ntBASIC4.25□□□□□ -1.73
CCDC28BQ9BUN5 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 RAD1P1-201ENST00000231383 813 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 RNU6-650P-201ENST00000365658 111 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AL353692.2-201ENST00000407054 335 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 RN7SKP206-201ENST00000410823 293 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AP001324.1-201ENST00000428553 399 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 TPTE2P3-201ENST00000441562 1189 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 IFNWP4-201ENST00000453148 294 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 RPS27AP17-201ENST00000463344 455 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 NPM1P17-201ENST00000479221 602 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 RN7SL101P-201ENST00000496350 279 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC108145.1-201ENST00000503770 153 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC025554.1-201ENST00000505641 188 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 IGKV3D-34-201ENST00000522638 302 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AP003102.1-201ENST00000525638 661 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 OSBPL9P3-201ENST00000534523 595 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC106785.3-201ENST00000564064 847 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 HNRNPCP4-201ENST00000571636 900 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 BNIP3P27-201ENST00000599991 412 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC098935.2-201ENST00000604222 466 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 SUMO2P15-201ENST00000604285 278 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 MIR1264-201ENST00000616374 69 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AL049555.1-201ENST00000562834 1933 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms