Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP88Q99567 MTCO2P20-201ENST00000437339 673 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.78□□□□□ -1.48
NUP88Q99567 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP88Q99567 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP88Q99567 RPL23AP56-201ENST00000460778 453 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AC005912.1-201ENST00000495392 255 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP88Q99567 AC010285.3-201ENST00000511668 676 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 RPS27AP18-201ENST00000515536 459 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 RNU6-416P-201ENST00000516265 103 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.78□□□□□ -1.48
NUP88Q99567 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP88Q99567 AC009712.1-201ENST00000564938 316 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP88Q99567 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP88Q99567 AL161616.1-201ENST00000611867 286 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AL592148.2-201ENST00000612210 372 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 AC116563.2-201ENST00000624751 535 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP88Q99567 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 MTND4P8-201ENST00000514997 1362 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AC009313.2-201ENST00000417893 1941 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.77□□□□□ -1.48
NUP88Q99567 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP88Q99567 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP88Q99567 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP88Q99567 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP88Q99567 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP88Q99567 SMG1P4-204ENST00000523028 4131 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP88Q99567 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP88Q99567 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 RNA5SP113-201ENST00000410486 84 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 OR2B7P-201ENST00000429302 934 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP88Q99567 PPIAP13-201ENST00000434706 478 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AL450023.3-201ENST00000440592 271 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 AC092809.1-201ENST00000441469 474 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 RPL7AP61-201ENST00000443410 636 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC007327.1-201ENST00000447461 264 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 TPMTP4-201ENST00000450749 678 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AL691482.1-201ENST00000453255 87 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 MRPL42P4-201ENST00000453267 443 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.77□□□□□ -1.49
NUP88Q99567 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP88Q99567 RN7SL738P-201ENST00000470264 297 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 RN7SL459P-201ENST00000481078 302 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 AC118282.2-201ENST00000508739 374 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP88Q99567 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.77□□□□□ -1.49
NUP88Q99567 AC092593.2-201ENST00000513866 913 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 SNORA3.4-201ENST00000515969 96 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 RN7SKP283-201ENST00000517197 270 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP88Q99567 MRPS36P5-201ENST00000551909 298 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC063949.1-201ENST00000552900 865 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC090695.1-201ENST00000561269 1222 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC145350.1-201ENST00000567426 208 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 MTND4LP24-201ENST00000572277 291 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 MIR4270-201ENST00000581799 70 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP88Q99567 AP001521.2-201ENST00000608772 546 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 TUSC7.1-201ENST00000610969 165 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC092106.3-201ENST00000611308 722 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 MIR6798-201ENST00000612887 67 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 AC048344.4-201ENST00000619744 527 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP88Q99567 AC068057.2-201ENST00000624047 895 ntBASIC5.77□□□□□ -1.49
NUP88Q99567 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NUP88Q99567 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP88Q99567 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP88Q99567 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP88Q99567 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP88Q99567 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP88Q99567 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP88Q99567 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
NUP88Q99567 ZNF652P1-201ENST00000442420 1309 ntBASIC5.76□□□□□ -1.49
NUP88Q99567 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP88Q99567 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
NUP88Q99567 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NUP88Q99567 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.76□□□□□ -1.49
NUP88Q99567 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP88Q99567 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP88Q99567 RNA5SP505-201ENST00000364748 108 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms