Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AL671855.1-201ENST00000446875 1203 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 OR52Y1P-201ENST00000452418 828 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 MTND6P32-201ENST00000457611 483 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AC022106.2-201ENST00000620114 757 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 RNA5SP399-201ENST00000364003 117 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 RPL23AP12-201ENST00000467573 473 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 OR7E13P-201ENST00000526052 910 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 MIR5004-201ENST00000579078 107 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 HSPA8P17-201ENST00000427029 1382 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC090337.1-201ENST00000579651 2074 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 OR56A5-201ENST00000340110 738 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 BX119904.3-201ENST00000428194 957 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 RPL27AP5-201ENST00000469428 449 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC010266.2-201ENST00000564741 3255 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC011503.2-201ENST00000594230 1500 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AP003175.1-201ENST00000641383 6658 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 SNORD96B-201ENST00000386148 79 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 RNF19BPX-201ENST00000426224 625 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 ATP5JP1-201ENST00000431631 322 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AL121890.1-201ENST00000435457 205 ntBASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CSMD1Q96PZ7 BTBD10P1-201ENST00000549824 1352 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 SCARNA15-201ENST00000607520 4325 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 MIR1911-201ENST00000410783 80 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 FABP3P2-201ENST00000453169 399 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 RPL21P10-201ENST00000463521 490 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 RPL23AP65-201ENST00000475608 468 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 RPL29P14-201ENST00000495837 428 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 HMGB1P21-201ENST00000502313 581 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 AL591419.1-201ENST00000427423 339 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 QTRT1P1-201ENST00000604344 1078 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 COX6CP4-201ENST00000605798 228 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 MIR432-201ENST00000606207 94 ntBASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CSMD1Q96PZ7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CSMD1Q96PZ7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.23□□□□□ -1.89
CSMD1Q96PZ7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.23□□□□□ -1.89
CSMD1Q96PZ7 AC007066.2-202ENST00000566531 914 ntBASIC3.23□□□□□ -1.89
CSMD1Q96PZ7 MIR4769-201ENST00000584126 77 ntBASIC3.23□□□□□ -1.89
CSMD1Q96PZ7 AL606834.2-201ENST00000602954 668 ntBASIC3.23□□□□□ -1.89
CSMD1Q96PZ7 AL391497.1-201ENST00000608671 547 ntBASIC3.23□□□□□ -1.89
CSMD1Q96PZ7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms