Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SLC25A51P1-201ENST00000468432 871 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 RPL23AP40-201ENST00000487630 390 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC025458.1-201ENST00000506046 166 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC025674.1-201ENST00000507074 324 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 STMN1P2-201ENST00000508435 439 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 IMPA1P1-201ENST00000510718 842 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 IGKV2-36-201ENST00000519999 223 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC068587.4-201ENST00000533893 186 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC090651.1-201ENST00000567865 634 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC012146.2-201ENST00000576545 416 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 BNIP3P9-201ENST00000603714 553 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AL590282.1-201ENST00000610379 1136 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC024884.1-201ENST00000620583 399 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AL136228.1-201ENST00000622221 319 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC129778.1-202ENST00000623812 261 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AL591379.1-207ENST00000635982 261 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 MTND4P23-201ENST00000447723 1363 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 CASC19-280ENST00000642102 1351 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AL161912.4-201ENST00000623889 2468 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 Y_RNA.38-201ENST00000362617 102 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 RPS3AP36-201ENST00000398190 775 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 OR7E101P-201ENST00000400428 513 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AL390316.1-201ENST00000406279 553 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 RNU2-6P-201ENST00000411404 190 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC073264.1-201ENST00000411508 416 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 RPS6P23-201ENST00000413224 722 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 NMD3P2-201ENST00000421815 761 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 MTND1P14-201ENST00000427400 950 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC073464.1-201ENST00000429823 534 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AL451074.3-201ENST00000437709 472 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC019235.1-201ENST00000503847 207 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC009646.1-201ENST00000510455 318 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 KCTD9P2-201ENST00000512203 1013 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC008562.1-201ENST00000521763 330 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AP001893.2-201ENST00000526949 202 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC013828.2-201ENST00000532487 235 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC009977.1-201ENST00000586015 570 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC119403.2-201ENST00000590960 598 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC008536.2-201ENST00000607284 349 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms