Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ACTR3BP3-201ENST00000565577 979 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 MIR3915-201ENST00000578518 97 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 NTAN1P1-201ENST00000603150 646 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC013244.1-201ENST00000604279 193 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AP004247.3-201ENST00000608682 624 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 SDR42E1P1-201ENST00000611327 477 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AL122125.1-201ENST00000616999 600 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AL607023.1-201ENST00000620045 248 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC135068.12-201ENST00000637370 931 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC096656.1-201ENST00000623826 1364 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC011493.1-201ENST00000596753 1632 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 ASNSP1-204ENST00000641977 1664 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC119744.1-201ENST00000454746 1715 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 Y_RNA.51-201ENST00000362725 102 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RNU6-1066P-201ENST00000363573 105 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 Y_RNA.311-201ENST00000365068 96 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 Y_RNA.560-201ENST00000384689 102 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RNU6-253P-201ENST00000384730 105 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AL031577.2-201ENST00000404133 280 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RPS15AP38-201ENST00000413110 372 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AL161449.1-201ENST00000414531 1199 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AL022400.1-201ENST00000423946 935 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 Z93242.1-201ENST00000427102 353 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 MTCO3P21-201ENST00000430791 643 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AL050321.1-201ENST00000432363 400 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC129850.1-201ENST00000436203 508 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AP000936.3-201ENST00000438127 255 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RPS29P10-201ENST00000439197 166 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 SEPT7P3-201ENST00000455017 621 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RPL7P1-201ENST00000468161 747 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RPL7P9-201ENST00000468715 747 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC079841.1-201ENST00000481228 950 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC097173.1-201ENST00000505862 819 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 MTCYBP37-201ENST00000510642 1133 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC007448.1-201ENST00000582714 234 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AL031985.2-201ENST00000600955 480 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC090425.2-201ENST00000608818 501 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC004948.1-201ENST00000609858 672 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 MIR6719-201ENST00000622428 87 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 CASC19-222ENST00000641321 1173 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 AC109315.1-201ENST00000584143 1347 ntBASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.85□□□□□ -1.63
CTHRC1Q96CG8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms