Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 SEPT14P24-201ENST00000447236 180 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 RPL23AP65-201ENST00000475608 468 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 RN7SL41P-201ENST00000476144 297 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC079841.1-201ENST00000481228 950 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 RN7SL101P-201ENST00000496350 279 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 SNRPCP2-201ENST00000504370 475 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 NAMPTP2-201ENST00000505629 1115 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC112198.4-201ENST00000515450 351 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 CYCSP28-201ENST00000534284 321 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC015912.2-201ENST00000571053 181 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC209154.1-201ENST00000582156 337 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 HMGB2P1-201ENST00000591146 634 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AL109659.3-201ENST00000624985 950 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC025263.3-201ENST00000622965 1396 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC099654.2-201ENST00000433031 1980 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC087190.4-201ENST00000574616 8334 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 U6.112-201ENST00000384129 70 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 RNU6-171P-201ENST00000384354 107 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 Z97832.1-201ENST00000402490 328 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AL160275.2-201ENST00000412010 394 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC004448.2-201ENST00000422360 586 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC093414.1-201ENST00000434712 514 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 RPS7P2-201ENST00000435134 607 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC000041.1-201ENST00000439655 175 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC005002.1-201ENST00000447458 540 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 RPS20P21-201ENST00000466859 343 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 RN7SL817P-201ENST00000480777 288 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 ATP5LP3-201ENST00000514223 304 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC104072.1-201ENST00000568817 668 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC006116.7-201ENST00000590141 756 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 DNAJC19P3-201ENST00000594491 331 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AC133794.1-201ENST00000602731 914 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AP000864.1-201ENST00000609424 650 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AL359535.1-201ENST00000612100 1087 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AL023881.1-201ENST00000621088 301 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 MIR6715B-201ENST00000637172 77 ntBASIC4.53□□□□□ -1.68
VPS33AQ96AX1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS33AQ96AX1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms