Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 AL354760.1-201ENST00000608357 643 ntBASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 AC023158.2-201ENST00000614876 543 ntBASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 AC009318.3-201ENST00000616916 503 ntBASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 AC022106.2-201ENST00000620114 757 ntBASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 AC019226.2-201ENST00000625973 424 ntBASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RAB40AQ8WXH6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RAB40AQ8WXH6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.59□□□□□ -1.68
RAB40AQ8WXH6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RAB40AQ8WXH6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.59□□□□□ -1.68
RAB40AQ8WXH6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 RNU6-1214P-201ENST00000363650 109 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 SNORD116-23-201ENST00000384645 92 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 RNU6-1300P-201ENST00000391046 108 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 RN7SKP16-201ENST00000410180 299 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 RN7SKP199-201ENST00000410325 305 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 SETP15-201ENST00000412724 337 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 EXTL2P1-201ENST00000446218 416 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AL672138.1-201ENST00000450604 1015 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 RFC5P1-201ENST00000454419 874 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 NF1P3-201ENST00000457709 450 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC026348.1-201ENST00000462549 1053 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 RN7SL515P-201ENST00000463999 297 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC010683.1-201ENST00000473673 378 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 C1GALT1P3-201ENST00000522049 819 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 OR5M2P-201ENST00000529003 936 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 NBEAP1-201ENST00000554452 979 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 GTF2IP8-201ENST00000560687 584 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC116553.2-201ENST00000564203 463 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AP005262.1-201ENST00000582646 997 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC008751.2-201ENST00000597885 980 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC025811.1-201ENST00000604312 472 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AL118522.2-201ENST00000616045 615 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 Z99129.2-201ENST00000619967 314 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AL512506.2-201ENST00000624472 458 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 CASC19-264ENST00000641912 1184 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 XPOTP1-201ENST00000443317 2398 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AL450326.2-201ENST00000421913 1962 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 AL031119.1-201ENST00000404707 1879 ntBASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RAB40AQ8WXH6 MAPK10-320ENST00000641462 6696 ntBASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 AP000542.2-201ENST00000623199 6179 ntBASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 MIR589-201ENST00000385238 99 ntBASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 MIR1286-201ENST00000408112 78 ntBASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 AL355433.1-201ENST00000422804 300 ntBASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 AC233981.1-201ENST00000423224 461 ntBASIC4.57□□□□□ -1.68
RAB40AQ8WXH6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms