Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC060771.1-201ENST00000582031 164 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC008385.1-201ENST00000604421 355 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC244100.4-201ENST00000617747 388 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 NLRP3P1-201ENST00000622303 1785 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 Y_RNA.132-201ENST00000363421 102 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 Y_RNA.202-201ENST00000364083 110 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 Y_RNA.259-201ENST00000364619 101 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 RNA5SP442-201ENST00000365050 107 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 RNU6-43P-201ENST00000384302 107 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 RNU6-1226P-201ENST00000384317 107 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 SNORD37.1-201ENST00000390968 65 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 RNU6-1055P-201ENST00000391085 107 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 SNORA75.4-201ENST00000391278 119 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 RN7SKP225-201ENST00000410405 352 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 RPL34P6-201ENST00000432390 345 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 RPL7P52-201ENST00000449200 742 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC006512.1-201ENST00000468816 291 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC117383.2-201ENST00000514722 322 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 snoU109.6-201ENST00000516831 118 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC073581.1-201ENST00000519036 575 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 OR7E96P-201ENST00000530816 976 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC068993.1-201ENST00000546724 589 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 NCAPGP2-201ENST00000557911 754 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC026464.5-201ENST00000562497 722 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 MIR4301-201ENST00000577203 66 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AL136984.1-201ENST00000607611 1893 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 AL445437.1-201ENST00000623157 3087 ntBASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.53□□□□□ -1.36
DEPDC4Q8N2C3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.36
DEPDC4Q8N2C3 AC119674.1-204ENST00000641348 1343 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AL157713.1-201ENST00000379752 1531 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RNU5A-8P-201ENST00000364102 114 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms