Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC078899.5-201ENST00000612475 178 ntBASIC2.97□□□□□ -1.93
SCXQ7RTU7 AL391597.1-201ENST00000618707 694 ntBASIC2.97□□□□□ -1.93
SCXQ7RTU7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC2.97□□□□□ -1.93
SCXQ7RTU7 AC004232.3-201ENST00000622977 525 ntBASIC2.97□□□□□ -1.93
SCXQ7RTU7 AC016717.3-201ENST00000624730 554 ntBASIC2.97□□□□□ -1.93
SCXQ7RTU7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.97□□□□□ -1.93
SCXQ7RTU7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.97□□□□□ -1.93
SCXQ7RTU7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCXQ7RTU7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCXQ7RTU7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.97□□□□□ -1.93
SCXQ7RTU7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.97□□□□□ -1.93
SCXQ7RTU7 AC017007.4-201ENST00000503353 1352 ntBASIC2.97□□□□□ -1.93
SCXQ7RTU7 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.97□□□□□ -1.93
SCXQ7RTU7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
SCXQ7RTU7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCXQ7RTU7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC2.97□□□□□ -1.93
SCXQ7RTU7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
SCXQ7RTU7 AC011266.1-201ENST00000624119 3569 ntBASIC2.96□□□□□ -1.93
SCXQ7RTU7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 CCT8P1-201ENST00000413611 1657 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 RNU4-39P-201ENST00000362455 127 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL607077.1-201ENST00000401718 499 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL356967.1-201ENST00000406305 431 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 GLS-204ENST00000409428 816 ntTSL 2 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 RNU4-25P-201ENST00000410569 230 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 CEACAMP8-201ENST00000413902 580 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 RAC1P3-201ENST00000416129 580 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 CHIAP3-201ENST00000423668 1133 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC007563.3-201ENST00000433233 371 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL353093.1-201ENST00000441292 436 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 Z99127.2-201ENST00000441426 334 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL157827.1-201ENST00000447622 132 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 ATP5A1P7-201ENST00000453978 1279 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC104763.1-201ENST00000475274 360 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 OR5H4P-201ENST00000510851 923 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC015795.1-201ENST00000513669 327 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 RN7SKP122-201ENST00000515923 296 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 EIF1AXP2-201ENST00000555940 413 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC105129.1-201ENST00000560250 297 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC092868.3-201ENST00000560515 784 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC008782.1-201ENST00000603386 430 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 COX6CP4-201ENST00000605798 228 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC091979.2-201ENST00000607514 214 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AL133243.1-201ENST00000614487 366 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 uc_338.32-201ENST00000615087 172 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 MLECP1-201ENST00000615893 709 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC140113.4-201ENST00000622087 222 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 AC015726.3-201ENST00000624501 418 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 U3.53-201ENST00000628922 216 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 MIR6830-201ENST00000636015 70 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 OR56B2P-202ENST00000641377 2453 ntBASIC2.96□□□□□ -1.94
SCXQ7RTU7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC2.96□□□□□ -1.94
SCXQ7RTU7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCXQ7RTU7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SCXQ7RTU7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SCXQ7RTU7 MARK2P15-201ENST00000432204 2186 ntBASIC2.95□□□□□ -1.94
SCXQ7RTU7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCXQ7RTU7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SCXQ7RTU7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
SCXQ7RTU7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SCXQ7RTU7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC2.95□□□□□ -1.94
SCXQ7RTU7 SAGE2P-201ENST00000420011 2126 ntBASIC2.95□□□□□ -1.94
SCXQ7RTU7 AL353743.4-201ENST00000422653 1547 ntBASIC2.95□□□□□ -1.94
SCXQ7RTU7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SCXQ7RTU7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SCXQ7RTU7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms