Protein–RNA interactions for Protein: Q16585

SGCB, Beta-sarcoglycan, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCBQ16585 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SGCBQ16585 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SGCBQ16585 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SGCBQ16585 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SGCBQ16585 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SGCBQ16585 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.29□□□□□ -1.72
SGCBQ16585 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SGCBQ16585 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SGCBQ16585 AP001642.1-201ENST00000624727 2117 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.28□□□□□ -1.72
SGCBQ16585 ERCC6-202ENST00000374127 1782 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SGCBQ16585 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 RNU1-83P-201ENST00000363426 164 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 RNA5SP391-201ENST00000363456 119 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 UBBP2-201ENST00000376781 231 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 RNU6-1279P-201ENST00000383917 103 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 RNU1-82P-201ENST00000390851 165 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.28□□□□□ -1.72
SGCBQ16585 AL591848.1-201ENST00000413092 322 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.28□□□□□ -1.72
SGCBQ16585 RPL7P57-201ENST00000423238 740 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AL645608.4-201ENST00000423619 154 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.28□□□□□ -1.72
SGCBQ16585 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.28□□□□□ -1.72
SGCBQ16585 ARL4AP4-201ENST00000434170 518 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 FABP5P3-201ENST00000437960 408 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC005154.2-201ENST00000438110 379 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 RPS26P2-201ENST00000440331 348 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC009263.1-201ENST00000441193 1239 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 HMGB1P48-201ENST00000446155 598 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 CYCSP53-201ENST00000455540 265 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 AC108751.2-201ENST00000469993 231 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC007686.1-201ENST00000488511 463 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.28□□□□□ -1.72
SGCBQ16585 AC011005.3-201ENST00000491624 395 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 MTCO2P9-201ENST00000503214 694 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC091868.1-201ENST00000508746 304 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC121161.1-201ENST00000510606 652 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.28□□□□□ -1.72
SGCBQ16585 AP000916.1-201ENST00000533869 835 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.28□□□□□ -1.72
SGCBQ16585 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.28□□□□□ -1.72
SGCBQ16585 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.28□□□□□ -1.72
SGCBQ16585 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.28□□□□□ -1.72
SGCBQ16585 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.28□□□□□ -1.72
SGCBQ16585 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.28□□□□□ -1.72
SGCBQ16585 AC084824.5-201ENST00000612009 413 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 VN1R9P-201ENST00000614184 867 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 AC018926.3-201ENST00000618841 406 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SGCBQ16585 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SGCBQ16585 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.28□□□□□ -1.72
SGCBQ16585 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SGCBQ16585 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.28□□□□□ -1.72
SGCBQ16585 MAPK10-286ENST00000641208 8747 ntBASIC4.28□□□□□ -1.72
SGCBQ16585 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.27□□□□□ -1.73
SGCBQ16585 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SGCBQ16585 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.27□□□□□ -1.73
SGCBQ16585 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SGCBQ16585 XPOTP1-201ENST00000443317 2398 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SGCBQ16585 NSRP1P1-201ENST00000444067 1693 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SGCBQ16585 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SGCBQ16585 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SGCBQ16585 RN7SKP74-201ENST00000362849 309 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.27□□□□□ -1.73
SGCBQ16585 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SGCBQ16585 AL590762.2-201ENST00000395798 571 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 AL080315.1-201ENST00000406055 466 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 RN7SKP267-201ENST00000410381 285 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 AL450992.3-201ENST00000413192 568 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.27□□□□□ -1.73
SGCBQ16585 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.27□□□□□ -1.73
SGCBQ16585 RWDD4P2-201ENST00000426392 563 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.27□□□□□ -1.73
SGCBQ16585 UBE2D3P3-201ENST00000426992 425 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 NPM1P34-201ENST00000428821 893 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.27□□□□□ -1.73
SGCBQ16585 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.27□□□□□ -1.73
SGCBQ16585 UBE2V1P5-201ENST00000440070 405 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SGCBQ16585 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.27□□□□□ -1.73
SGCBQ16585 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.27□□□□□ -1.73
SGCBQ16585 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SGCBQ16585 MRPL35P4-201ENST00000453682 566 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 EIF2S2P5-201ENST00000457635 968 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 AC008379.1-201ENST00000463655 464 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.27□□□□□ -1.73
SGCBQ16585 RWDD4P1-201ENST00000488019 565 ntBASIC4.27□□□□□ -1.73
SGCBQ16585 AC025164.1-201ENST00000496249 478 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms