Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC051619.2-201ENST00000559063 397 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC068714.1-201ENST00000559623 800 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC008782.1-201ENST00000603386 430 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AL049634.3-201ENST00000604968 457 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC012531.5-201ENST00000611375 151 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC008785.1-201ENST00000624475 456 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 NOL8P1-201ENST00000508336 3529 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 RPS4XP5-202ENST00000449995 1334 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC025031.4-201ENST00000621248 3271 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC008033.1-201ENST00000216407 1162 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC010132.2-201ENST00000295493 1043 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 OR4K15-201ENST00000305051 1216 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 SNORD66.1-201ENST00000391230 76 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC097374.1-203ENST00000400783 485 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC069213.2-201ENST00000420238 366 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC006065.1-201ENST00000422539 802 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 RPS26P40-201ENST00000435209 294 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 VN1R96P-201ENST00000446052 858 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC053481.1-201ENST00000467217 306 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 RPL7L1P8-201ENST00000469911 741 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC069499.1-201ENST00000489433 509 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC108145.1-201ENST00000503770 153 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC021483.2-201ENST00000567415 758 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC079587.1-201ENST00000603846 277 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 Z82195.1-201ENST00000604558 398 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC025175.1-201ENST00000606482 759 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AL592148.3-201ENST00000608771 2646 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 Mico1.1-201ENST00000611698 204 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AL021997.2-201ENST00000615674 271 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AL391261.4-201ENST00000616012 481 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AL356274.1-201ENST00000617064 410 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 MIR6891-201ENST00000618788 93 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC002044.3-201ENST00000623314 541 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AC138907.10-201ENST00000623708 983 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 AP000843.1-201ENST00000624880 701 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 OR5AC4P-202ENST00000642086 985 ntBASIC3.23□□□□□ -1.89
HIST1H1AQ02539 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.23□□□□□ -1.89
HIST1H1AQ02539 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 RAD17P1-201ENST00000418130 2042 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 DHX40P1-201ENST00000588725 1412 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 RNU1-130P-201ENST00000363930 160 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 U3.15-201ENST00000365398 212 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 RPS16P5-201ENST00000406501 404 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 TMSB10P2-201ENST00000416049 131 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 VN1R31P-201ENST00000417498 730 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 PTP4A1P5-201ENST00000420305 455 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 TPTE2P3-201ENST00000441562 1189 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 DHFRP3-201ENST00000455595 559 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 HMGN2P7-201ENST00000456186 273 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 CEACAMP4-201ENST00000457676 421 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 RNU7-170P-201ENST00000459303 61 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms