Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPS26P40-201ENST00000435209 294 ntBASIC4.52□□□□□ -1.69
TPM4P67936 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.52□□□□□ -1.69
TPM4P67936 AC016724.1-201ENST00000453215 421 ntBASIC4.52□□□□□ -1.69
TPM4P67936 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.52□□□□□ -1.69
TPM4P67936 AC010307.1-201ENST00000467206 836 ntBASIC4.52□□□□□ -1.69
TPM4P67936 RPL7P1-201ENST00000468161 747 ntBASIC4.52□□□□□ -1.69
TPM4P67936 RPL7P9-201ENST00000468715 747 ntBASIC4.52□□□□□ -1.69
TPM4P67936 RWDD4P1-201ENST00000488019 565 ntBASIC4.52□□□□□ -1.69
TPM4P67936 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
TPM4P67936 IGKV2D-23-201ENST00000518179 286 ntBASIC4.52□□□□□ -1.69
TPM4P67936 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM4P67936 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM4P67936 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM4P67936 OR5D15P-201ENST00000531671 942 ntBASIC4.52□□□□□ -1.69
TPM4P67936 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM4P67936 AC022968.1-201ENST00000567372 442 ntBASIC4.52□□□□□ -1.69
TPM4P67936 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
TPM4P67936 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
TPM4P67936 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.52□□□□□ -1.69
TPM4P67936 AC090948.1-201ENST00000607464 549 ntBASIC4.52□□□□□ -1.69
TPM4P67936 SDR42E1P1-201ENST00000611327 477 ntBASIC4.52□□□□□ -1.69
TPM4P67936 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM4P67936 AL158163.1-201ENST00000603915 1649 ntBASIC4.52□□□□□ -1.69
TPM4P67936 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TPM4P67936 RARSP1-201ENST00000542842 1418 ntBASIC4.52□□□□□ -1.69
TPM4P67936 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.52□□□□□ -1.69
TPM4P67936 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.52□□□□□ -1.69
TPM4P67936 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM4P67936 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.51□□□□□ -1.69
TPM4P67936 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.51□□□□□ -1.69
TPM4P67936 SNORA60-201ENST00000362396 134 ntBASIC4.51□□□□□ -1.69
TPM4P67936 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TPM4P67936 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM4P67936 RPS26P13-201ENST00000419030 330 ntBASIC4.51□□□□□ -1.69
TPM4P67936 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.51□□□□□ -1.69
TPM4P67936 MTCO3P20-201ENST00000454926 688 ntBASIC4.51□□□□□ -1.69
TPM4P67936 RN7SL329P-201ENST00000467740 299 ntBASIC4.51□□□□□ -1.69
TPM4P67936 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM4P67936 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM4P67936 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM4P67936 AC093824.1-201ENST00000508796 343 ntBASIC4.51□□□□□ -1.69
TPM4P67936 RNA5SP49-201ENST00000516450 115 ntBASIC4.51□□□□□ -1.69
TPM4P67936 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM4P67936 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.51□□□□□ -1.69
TPM4P67936 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TPM4P67936 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM4P67936 AC091515.1-201ENST00000548110 679 ntBASIC4.51□□□□□ -1.69
TPM4P67936 TVP23BP1-201ENST00000557500 617 ntBASIC4.51□□□□□ -1.69
TPM4P67936 AC084757.1-201ENST00000559987 490 ntBASIC4.51□□□□□ -1.69
TPM4P67936 AC025627.2-201ENST00000576220 160 ntBASIC4.51□□□□□ -1.69
TPM4P67936 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.51□□□□□ -1.69
TPM4P67936 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TPM4P67936 MIR7155-201ENST00000615925 56 ntBASIC4.51□□□□□ -1.69
TPM4P67936 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TPM4P67936 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.51□□□□□ -1.69
TPM4P67936 AC008725.1-201ENST00000605123 2263 ntBASIC4.51□□□□□ -1.69
TPM4P67936 AL592437.2-201ENST00000421655 2434 ntBASIC4.51□□□□□ -1.69
TPM4P67936 LINC00561-201ENST00000565815 2738 ntBASIC4.51□□□□□ -1.69
TPM4P67936 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM4P67936 AC116667.1-201ENST00000604855 2072 ntBASIC4.5□□□□□ -1.69
TPM4P67936 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.5□□□□□ -1.69
TPM4P67936 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.5□□□□□ -1.69
TPM4P67936 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TPM4P67936 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TPM4P67936 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TPM4P67936 AC103591.2-201ENST00000265259 766 ntBASIC4.5□□□□□ -1.69
TPM4P67936 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TPM4P67936 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TPM4P67936 RPL23AP59-201ENST00000399415 461 ntBASIC4.5□□□□□ -1.69
TPM4P67936 RNU4-25P-201ENST00000410569 230 ntBASIC4.5□□□□□ -1.69
TPM4P67936 RN7SKP182-201ENST00000410772 298 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM4P67936 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.5□□□□□ -1.69
TPM4P67936 DPY19L1P2-201ENST00000426647 915 ntBASIC4.5□□□□□ -1.69
TPM4P67936 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.5□□□□□ -1.69
TPM4P67936 RPS6P12-201ENST00000432491 726 ntBASIC4.5□□□□□ -1.69
TPM4P67936 RPL12P3-201ENST00000440080 396 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AC009263.1-201ENST00000441193 1239 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AC092809.1-201ENST00000441469 474 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AC006011.1-201ENST00000442758 349 ntBASIC4.5□□□□□ -1.69
TPM4P67936 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.5□□□□□ -1.69
TPM4P67936 MTND2P28-201ENST00000457540 1044 ntBASIC4.5□□□□□ -1.69
TPM4P67936 OR52A4P-201ENST00000472867 958 ntBASIC4.5□□□□□ -1.69
TPM4P67936 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM4P67936 AC004069.2-201ENST00000505438 1114 ntBASIC4.5□□□□□ -1.69
TPM4P67936 BTF3L4P4-201ENST00000506381 449 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM4P67936 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.5□□□□□ -1.69
TPM4P67936 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM4P67936 AC090953.1-201ENST00000604305 1092 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AC007390.2-201ENST00000606229 3803 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM4P67936 AL512624.1-201ENST00000613638 469 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AC124312.6-202ENST00000623624 418 ntBASIC4.5□□□□□ -1.69
TPM4P67936 AP003497.2-201ENST00000624220 967 ntBASIC4.5□□□□□ -1.69
TPM4P67936 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.5□□□□□ -1.69
TPM4P67936 AC244205.2-202ENST00000635781 342 ntBASIC4.5□□□□□ -1.69
TPM4P67936 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TPM4P67936 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TPM4P67936 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms