Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN6P56747 TRIM60P17-201ENST00000415181 719 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN6P56747 AC018644.1-201ENST00000429934 551 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.12□□□□□ -1.75
CLDN6P56747 RPEP2-201ENST00000432149 701 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN6P56747 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN6P56747 AC007389.2-201ENST00000434630 306 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 AL500522.2-201ENST00000448562 343 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.12□□□□□ -1.75
CLDN6P56747 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN6P56747 CLIC4P1-201ENST00000453177 535 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 RPL31P53-201ENST00000457065 348 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 RPL7P22-201ENST00000466005 733 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN6P56747 KCTD9P2-201ENST00000512203 1013 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 HMGB1P19-201ENST00000517578 577 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 HSPE1P5-201ENST00000561489 272 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 FAM60CP-201ENST00000591086 664 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 AC005520.3-201ENST00000602874 370 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 AC034236.3-201ENST00000605999 461 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 AL008729.2-201ENST00000606393 473 ntBASIC4.12□□□□□ -1.75
CLDN6P56747 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN6P56747 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN6P56747 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN6P56747 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN6P56747 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CLDN6P56747 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CLDN6P56747 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN6P56747 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN6P56747 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN6P56747 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
CLDN6P56747 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
CLDN6P56747 AC011155.1-201ENST00000316512 456 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 IL6STP1-201ENST00000346911 1020 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CLDN6P56747 RNU1-63P-201ENST00000383902 164 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 AL034374.1-201ENST00000406329 351 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 AC009237.5-201ENST00000414271 501 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 CRYBB2P1-203ENST00000415709 538 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 AL121578.1-201ENST00000428051 892 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN6P56747 CACYBPP1-201ENST00000438592 684 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 ARL4AP3-201ENST00000441452 574 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN6P56747 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN6P56747 APOOP2-201ENST00000461561 539 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 RPL7P49-201ENST00000471402 708 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CLDN6P56747 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.11□□□□□ -1.75
CLDN6P56747 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.11□□□□□ -1.75
CLDN6P56747 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN6P56747 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN6P56747 AL606490.9-201ENST00000603331 271 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 AL161756.2-201ENST00000604597 246 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 AC025175.1-201ENST00000606482 759 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 AL021997.2-201ENST00000615674 271 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 AC005086.4-201ENST00000623065 213 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 FP325313.1-201ENST00000638228 703 ntBASIC4.11□□□□□ -1.75
CLDN6P56747 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CLDN6P56747 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.11□□□□□ -1.75
CLDN6P56747 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLDN6P56747 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN6P56747 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN6P56747 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CLDN6P56747 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN6P56747 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN6P56747 OR56B2P-201ENST00000317102 954 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN6P56747 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CLDN6P56747 MIR200C-201ENST00000384980 68 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CLDN6P56747 MIR921-201ENST00000401133 56 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 RN7SKP182-201ENST00000410772 298 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.1□□□□□ -1.75
CLDN6P56747 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN6P56747 AP000942.1-201ENST00000463969 747 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 AC091564.1-201ENST00000464563 479 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN6P56747 AC021146.3-201ENST00000511911 260 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 AC099522.1-202ENST00000514718 367 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN6P56747 TRMT10BP1-201ENST00000519377 943 ntBASIC4.1□□□□□ -1.75
CLDN6P56747 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN6P56747 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN6P56747 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN6P56747 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.1□□□□□ -1.75
CLDN6P56747 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN6P56747 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms