Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
GFRA1P56159 RN7SKP15-201ENST00000364742 309 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 RNU6-952P-201ENST00000391164 108 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 PEX12P1-201ENST00000400284 1048 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 CCNG1P1-201ENST00000406783 885 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 TPMTP2-201ENST00000414372 726 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.48□□□□□ -1.53
GFRA1P56159 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA1P56159 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 RAD23BP1-201ENST00000421404 1227 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 RPS3AP54-201ENST00000435535 734 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 HMGB1P31-201ENST00000437242 427 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AC092013.1-201ENST00000438795 332 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 RPS26P56-201ENST00000444468 240 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 NFU1P2-201ENST00000448700 469 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 RPL23AP60-201ENST00000450011 454 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AC016027.4-201ENST00000450866 277 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC144530.1-201ENST00000452862 555 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 KCTD9P5-201ENST00000504141 1170 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA1P56159 HMGB1P29-201ENST00000505659 499 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.48□□□□□ -1.53
GFRA1P56159 HSPA8P13-201ENST00000523715 472 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 CENPUP2-201ENST00000555897 1186 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA1P56159 AP000907.4-201ENST00000604143 237 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC108673.3-201ENST00000609183 335 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AL365181.4-201ENST00000609800 547 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA1P56159 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA1P56159 AC092794.2-201ENST00000620933 563 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AC009120.7-201ENST00000623452 780 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AC129778.1-202ENST00000623812 261 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AL591379.1-207ENST00000635982 261 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA1P56159 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
GFRA1P56159 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 NLRP3P1-201ENST00000622303 1785 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
GFRA1P56159 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.47□□□□□ -1.53
GFRA1P56159 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 RNA5SP375-201ENST00000362975 119 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
GFRA1P56159 SNORD115.1-201ENST00000391109 76 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 EIF5P1-201ENST00000400019 1231 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
GFRA1P56159 DHFRP6-201ENST00000401776 268 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 RNU4-55P-201ENST00000410731 137 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 MTCO1P17-201ENST00000411522 491 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 AL357752.1-201ENST00000412817 349 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.47□□□□□ -1.53
GFRA1P56159 BX295541.1-201ENST00000417774 250 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC007562.1-201ENST00000421819 517 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 AC007568.1-201ENST00000422912 471 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
GFRA1P56159 AC079807.1-201ENST00000429993 481 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC023347.2-201ENST00000433994 462 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC009961.2-201ENST00000435771 251 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AL451074.3-201ENST00000437709 472 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 RSU1P2-202ENST00000437884 485 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms