Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXG1P55316 AC002400.1-201ENST00000569310 726 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXG1P55316 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXG1P55316 MIR548S-201ENST00000581352 82 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.53□□□□□ -1.68
FOXG1P55316 AC012254.4-201ENST00000588843 273 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXG1P55316 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXG1P55316 AL606834.2-201ENST00000602954 668 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 AC079089.3-201ENST00000603094 673 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 TUG1_1.1-201ENST00000610654 145 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 AL121612.2-201ENST00000612261 482 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 AC090510.2-201ENST00000617465 629 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXG1P55316 AC074140.1-201ENST00000621617 208 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 AC015722.2-201ENST00000622210 551 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
FOXG1P55316 AC107021.2-201ENST00000567714 2095 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXG1P55316 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXG1P55316 AL133268.1-201ENST00000405676 1401 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXG1P55316 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
FOXG1P55316 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
FOXG1P55316 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXG1P55316 AC026523.2-201ENST00000625039 7739 ntBASIC4.53□□□□□ -1.68
FOXG1P55316 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
FOXG1P55316 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXG1P55316 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 AC006210.2-201ENST00000367074 1545 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 AL132640.2-201ENST00000559968 1698 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
FOXG1P55316 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
FOXG1P55316 ZNF833P-201ENST00000424938 1494 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC006042.3-201ENST00000454684 1469 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
FOXG1P55316 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
FOXG1P55316 Y_RNA.88-201ENST00000363029 99 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 SNORA58B-201ENST00000364259 136 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 RNA5SP455-201ENST00000365190 119 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 SNORA26.8-201ENST00000391306 124 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 RN7SKP114-201ENST00000410327 279 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 RNA5SP296-201ENST00000410523 111 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 RN7SKP213-201ENST00000410746 298 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 RPL12P9-201ENST00000412942 488 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 CDK8P2-201ENST00000415020 547 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXG1P55316 AC098592.1-201ENST00000419352 333 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC006960.1-201ENST00000419980 153 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 PTP4A1P1-201ENST00000420539 515 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 RPS27AP6-201ENST00000427962 448 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.52□□□□□ -1.69
FOXG1P55316 HSPD1P12-201ENST00000429127 1069 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AL161722.2-201ENST00000434731 981 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC009263.1-201ENST00000441193 1239 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXG1P55316 RHEBP2-201ENST00000450289 600 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXG1P55316 AL109741.2-201ENST00000455561 343 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXG1P55316 RPL7AP6-201ENST00000477943 801 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC004453.1-201ENST00000487895 408 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC069304.1-201ENST00000491593 704 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.52□□□□□ -1.69
FOXG1P55316 RPS24P16-201ENST00000497294 392 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC116353.2-201ENST00000505332 712 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXG1P55316 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXG1P55316 AC021146.7-201ENST00000509604 775 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 AC097486.1-201ENST00000515331 210 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 RN7SKP66-201ENST00000516681 231 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXG1P55316 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXG1P55316 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXG1P55316 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXG1P55316 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXG1P55316 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
FOXG1P55316 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXG1P55316 AC245505.1-201ENST00000556398 224 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXG1P55316 AC019322.1-201ENST00000571869 389 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXG1P55316 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXG1P55316 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXG1P55316 AC087763.1-201ENST00000603391 286 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 AL627230.1-201ENST00000613077 211 ntBASIC4.52□□□□□ -1.69
FOXG1P55316 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms