Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH11P55287 AL035407.2-201ENST00000454090 378 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC007686.1-201ENST00000488511 463 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC105233.1-201ENST00000498840 781 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC093752.1-206ENST00000511823 336 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC108471.1-201ENST00000513977 287 ntBASIC4.34□□□□□ -1.71
CDH11P55287 IGKV2D-10-201ENST00000520194 281 ntBASIC4.34□□□□□ -1.71
CDH11P55287 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH11P55287 GSTP1P1-201ENST00000548078 319 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC025260.1-201ENST00000548858 430 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH11P55287 RPL21P7-201ENST00000557463 483 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH11P55287 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH11P55287 AC018552.1-201ENST00000562099 811 ntBASIC4.34□□□□□ -1.71
CDH11P55287 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH11P55287 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH11P55287 VN1R87P-201ENST00000596706 487 ntBASIC4.34□□□□□ -1.71
CDH11P55287 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH11P55287 AC063944.3-201ENST00000609969 533 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC140113.4-201ENST00000622087 222 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC005086.4-201ENST00000623065 213 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH11P55287 U6.107-201ENST00000637108 79 ntBASIC4.34□□□□□ -1.71
CDH11P55287 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH11P55287 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CDH11P55287 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH11P55287 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.34□□□□□ -1.71
CDH11P55287 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH11P55287 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDH11P55287 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDH11P55287 AP001273.1-201ENST00000624493 3152 ntBASIC4.34□□□□□ -1.72
CDH11P55287 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CDH11P55287 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH11P55287 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH11P55287 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH11P55287 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH11P55287 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 OR52B1P-201ENST00000316506 909 ntBASIC4.33□□□□□ -1.72
CDH11P55287 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH11P55287 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH11P55287 RNA5SP443-201ENST00000363083 132 ntBASIC4.33□□□□□ -1.72
CDH11P55287 RNU6-236P-201ENST00000363886 106 ntBASIC4.33□□□□□ -1.72
CDH11P55287 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CDH11P55287 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH11P55287 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH11P55287 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH11P55287 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AF186996.5-201ENST00000418098 904 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH11P55287 AC008072.1-201ENST00000434254 824 ntBASIC4.33□□□□□ -1.72
CDH11P55287 PPIAP13-201ENST00000434706 478 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH11P55287 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH11P55287 MTND6P18-201ENST00000439477 513 ntBASIC4.33□□□□□ -1.72
CDH11P55287 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH11P55287 AC104651.2-201ENST00000447549 528 ntBASIC4.33□□□□□ -1.72
CDH11P55287 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH11P55287 DEFB109F-201ENST00000491870 277 ntBASIC4.33□□□□□ -1.72
CDH11P55287 ARL4AP1-201ENST00000503220 705 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH11P55287 AC021146.3-201ENST00000511911 260 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH11P55287 AC083923.1-201ENST00000523708 376 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.33□□□□□ -1.72
CDH11P55287 AC107918.3-201ENST00000533272 382 ntBASIC4.33□□□□□ -1.72
CDH11P55287 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH11P55287 ZNF971P-201ENST00000562068 1249 ntBASIC4.33□□□□□ -1.72
CDH11P55287 BGLT3-201ENST00000564523 994 ntBASIC4.33□□□□□ -1.72
CDH11P55287 ATP5J2P6-201ENST00000565203 266 ntBASIC4.33□□□□□ -1.72
CDH11P55287 MIR4675-201ENST00000577898 77 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH11P55287 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH11P55287 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH11P55287 AC013244.3-201ENST00000605614 388 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AC024060.1-201ENST00000607052 494 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AL353600.1-201ENST00000608148 251 ntBASIC4.33□□□□□ -1.72
CDH11P55287 uc_338.18-201ENST00000615451 175 ntBASIC4.33□□□□□ -1.72
CDH11P55287 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 AC131238.1-201ENST00000617135 328 ntBASIC4.33□□□□□ -1.72
CDH11P55287 LINC00901.1-201ENST00000617252 152 ntBASIC4.33□□□□□ -1.72
CDH11P55287 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH11P55287 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH11P55287 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 377.4 ms