Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
CDH6P55285 AL035696.2-201ENST00000407941 709 ntBASIC4.35□□□□□ -1.71
CDH6P55285 RN7SKP222-201ENST00000410651 315 ntBASIC4.35□□□□□ -1.71
CDH6P55285 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH6P55285 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH6P55285 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH6P55285 RPL18P10-201ENST00000425606 538 ntBASIC4.35□□□□□ -1.71
CDH6P55285 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH6P55285 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH6P55285 ARL5AP3-201ENST00000439327 386 ntBASIC4.35□□□□□ -1.71
CDH6P55285 VN1R48P-201ENST00000448149 1036 ntBASIC4.35□□□□□ -1.71
CDH6P55285 RAD23BP3-201ENST00000454157 1152 ntBASIC4.35□□□□□ -1.71
CDH6P55285 AC006517.1-201ENST00000480485 328 ntBASIC4.35□□□□□ -1.71
CDH6P55285 AF213884.1-201ENST00000488102 463 ntBASIC4.35□□□□□ -1.71
CDH6P55285 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH6P55285 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH6P55285 C1GALT1P3-201ENST00000522049 819 ntBASIC4.35□□□□□ -1.71
CDH6P55285 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH6P55285 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH6P55285 PSMB7P1-201ENST00000556349 514 ntBASIC4.35□□□□□ -1.71
CDH6P55285 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH6P55285 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH6P55285 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH6P55285 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
CDH6P55285 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH6P55285 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH6P55285 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH6P55285 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH6P55285 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH6P55285 AC008785.1-201ENST00000624475 456 ntBASIC4.35□□□□□ -1.71
CDH6P55285 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH6P55285 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CDH6P55285 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CDH6P55285 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH6P55285 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH6P55285 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CDH6P55285 AC092162.3-201ENST00000624511 1624 ntBASIC4.35□□□□□ -1.71
CDH6P55285 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH6P55285 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH6P55285 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH6P55285 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH6P55285 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH6P55285 RNU6-304P-201ENST00000364855 107 ntBASIC4.34□□□□□ -1.71
CDH6P55285 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH6P55285 SNORA56-201ENST00000383966 129 ntBASIC4.34□□□□□ -1.71
CDH6P55285 AC240504.1-201ENST00000395709 845 ntBASIC4.34□□□□□ -1.71
CDH6P55285 LAP3P1-201ENST00000403648 294 ntBASIC4.34□□□□□ -1.71
CDH6P55285 AP000357.1-201ENST00000409926 1165 ntBASIC4.34□□□□□ -1.71
CDH6P55285 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH6P55285 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH6P55285 RPL23AP46-201ENST00000438548 490 ntBASIC4.34□□□□□ -1.71
CDH6P55285 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH6P55285 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH6P55285 NDUFS5P3-201ENST00000450668 321 ntBASIC4.34□□□□□ -1.71
CDH6P55285 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
CDH6P55285 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH6P55285 AC109327.1-201ENST00000471666 403 ntBASIC4.34□□□□□ -1.71
CDH6P55285 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH6P55285 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
CDH6P55285 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH6P55285 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CDH6P55285 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH6P55285 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH6P55285 AC105233.3-201ENST00000531125 744 ntBASIC4.34□□□□□ -1.71
CDH6P55285 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH6P55285 AC069240.1-201ENST00000548774 375 ntBASIC4.34□□□□□ -1.71
CDH6P55285 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH6P55285 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH6P55285 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH6P55285 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH6P55285 AP006248.2-201ENST00000623309 592 ntBASIC4.34□□□□□ -1.71
CDH6P55285 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH6P55285 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH6P55285 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH6P55285 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH6P55285 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH6P55285 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CDH6P55285 Z73965.1-201ENST00000623412 2297 ntBASIC4.33□□□□□ -1.72
CDH6P55285 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.33□□□□□ -1.72
CDH6P55285 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH6P55285 Z82217.1-201ENST00000625157 8149 ntBASIC4.33□□□□□ -1.72
CDH6P55285 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH6P55285 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH6P55285 RNA5SP366-201ENST00000365454 123 ntBASIC4.33□□□□□ -1.72
CDH6P55285 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH6P55285 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH6P55285 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH6P55285 RNU4-25P-201ENST00000410569 230 ntBASIC4.33□□□□□ -1.72
CDH6P55285 RN7SKP182-201ENST00000410772 298 ntBASIC4.33□□□□□ -1.72
CDH6P55285 FAR2P2-201ENST00000413041 594 ntBASIC4.33□□□□□ -1.72
CDH6P55285 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH6P55285 OR2X1P-201ENST00000421144 687 ntBASIC4.33□□□□□ -1.72
CDH6P55285 FAR2P4-202ENST00000425399 584 ntBASIC4.33□□□□□ -1.72
CDH6P55285 IFNWP4-201ENST00000453148 294 ntBASIC4.33□□□□□ -1.72
CDH6P55285 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.33□□□□□ -1.72
CDH6P55285 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH6P55285 RN7SL481P-201ENST00000477764 299 ntBASIC4.33□□□□□ -1.72
CDH6P55285 AC041039.1-201ENST00000485656 536 ntBASIC4.33□□□□□ -1.72
CDH6P55285 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH6P55285 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms