Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL7P55-201ENST00000450522 746 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 NDUFS5P3-201ENST00000450668 321 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.77□□□□□ -1.65
LIMK1P53667 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK1P53667 AC104687.1-201ENST00000485829 412 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.77□□□□□ -1.65
LIMK1P53667 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK1P53667 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
LIMK1P53667 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK1P53667 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK1P53667 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK1P53667 AC069061.3-201ENST00000582254 823 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.77□□□□□ -1.65
LIMK1P53667 MTATP6P2-201ENST00000603319 678 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AC233280.2-201ENST00000603917 1070 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AC055764.2-201ENST00000610089 670 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 FAM27B-201ENST00000610601 213 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 MIR7973-1-201ENST00000614683 76 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AC006249.1-201ENST00000621223 471 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AP003072.4-201ENST00000624580 310 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 AC009452.1-201ENST00000640823 606 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LIMK1P53667 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK1P53667 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 AL136964.1-201ENST00000622038 2990 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK1P53667 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 SAGE2P-201ENST00000420011 2126 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
LIMK1P53667 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 AL078604.1-201ENST00000404609 466 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.76□□□□□ -1.65
LIMK1P53667 SNORA11C-201ENST00000408532 129 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK1P53667 RPS12P5-201ENST00000423449 371 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 FABP7P1-201ENST00000424004 391 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 VN1R42P-201ENST00000424651 344 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 UBE2D3P3-201ENST00000426992 425 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 RPS12P10-201ENST00000427031 377 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 AC012497.1-201ENST00000429392 575 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 AC009238.2-201ENST00000431026 355 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 AL512661.1-201ENST00000434586 1253 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 CBX1P4-201ENST00000439415 457 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 RPL6P5-201ENST00000445678 828 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 CYCSP34-201ENST00000458172 304 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 ECM1P2-201ENST00000503354 1577 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 PRELID3BP7-201ENST00000503606 469 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK1P53667 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.76□□□□□ -1.65
LIMK1P53667 IGKV2-23-201ENST00000518729 323 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.76□□□□□ -1.65
LIMK1P53667 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.76□□□□□ -1.65
LIMK1P53667 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK1P53667 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK1P53667 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK1P53667 AC084783.1-201ENST00000565846 910 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK1P53667 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK1P53667 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK1P53667 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.76□□□□□ -1.65
LIMK1P53667 AP002371.2-201ENST00000624450 503 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.76□□□□□ -1.65
LIMK1P53667 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LIMK1P53667 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK1P53667 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.76□□□□□ -1.65
LIMK1P53667 RNF6P1-201ENST00000444889 1784 ntBASIC4.76□□□□□ -1.65
LIMK1P53667 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
LIMK1P53667 RNU6-1005P-201ENST00000384519 107 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 U3.30-201ENST00000391308 210 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 RPS24P12-201ENST00000402084 394 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 RNU4-27P-201ENST00000410889 139 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 ATG4AP1-201ENST00000416893 538 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 RPL36AP10-201ENST00000421785 322 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AL353093.1-201ENST00000441292 436 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 BX842559.2-201ENST00000451418 605 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AC091167.1-201ENST00000492017 396 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms