Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 GTF2IP2-201ENST00000424290 697 ntBASIC6.04□□□□□ -1.44
MRE11P49959 RPS4XP16-201ENST00000427198 791 ntBASIC6.04□□□□□ -1.44
MRE11P49959 HIGD1AP12-201ENST00000427832 281 ntBASIC6.04□□□□□ -1.44
MRE11P49959 DLGAP5P1-201ENST00000430307 464 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AC016712.1-201ENST00000431088 378 ntBASIC6.04□□□□□ -1.44
MRE11P49959 FGF7P5-201ENST00000441829 291 ntBASIC6.04□□□□□ -1.44
MRE11P49959 CASP3P1-201ENST00000446037 609 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.04□□□□□ -1.44
MRE11P49959 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.04□□□□□ -1.44
MRE11P49959 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.04□□□□□ -1.44
MRE11P49959 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.04□□□□□ -1.44
MRE11P49959 RNU7-125P-201ENST00000458760 62 ntBASIC6.04□□□□□ -1.44
MRE11P49959 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.04□□□□□ -1.44
MRE11P49959 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.04□□□□□ -1.44
MRE11P49959 AC006530.1-201ENST00000555980 571 ntBASIC6.04□□□□□ -1.44
MRE11P49959 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.04□□□□□ -1.44
MRE11P49959 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.04□□□□□ -1.44
MRE11P49959 AC009027.1-201ENST00000604510 479 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AC011626.1-201ENST00000604710 562 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AC064872.1-201ENST00000604823 1072 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AC245297.2-201ENST00000610119 565 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AC009237.15-201ENST00000610252 501 ntBASIC6.04□□□□□ -1.44
MRE11P49959 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MRE11P49959 RN7SL544P-201ENST00000617232 284 ntBASIC6.04□□□□□ -1.44
MRE11P49959 RN7SL763P-201ENST00000620922 284 ntBASIC6.04□□□□□ -1.44
MRE11P49959 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 AC084035.1-201ENST00000634543 607 ntBASIC6.04□□□□□ -1.44
MRE11P49959 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MRE11P49959 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
MRE11P49959 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
MRE11P49959 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 PANDAR-201ENST00000629595 1506 ntBASIC6.04□□□□□ -1.44
MRE11P49959 TTC39DP-201ENST00000416781 1688 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AC083843.2-201ENST00000568248 6253 ntBASIC6.03□□□□□ -1.44
MRE11P49959 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.03□□□□□ -1.44
MRE11P49959 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
MRE11P49959 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.03□□□□□ -1.44
MRE11P49959 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.03□□□□□ -1.44
MRE11P49959 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 RNA5SP305-201ENST00000362665 119 ntBASIC6.03□□□□□ -1.44
MRE11P49959 Y_RNA.194-201ENST00000363985 102 ntBASIC6.03□□□□□ -1.44
MRE11P49959 OR8V1P-201ENST00000395193 873 ntBASIC6.03□□□□□ -1.44
MRE11P49959 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.03□□□□□ -1.44
MRE11P49959 RNA5SP296-201ENST00000410523 111 ntBASIC6.03□□□□□ -1.44
MRE11P49959 RPL26P37-201ENST00000411983 438 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AC013429.2-201ENST00000418798 781 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.03□□□□□ -1.44
MRE11P49959 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.03□□□□□ -1.44
MRE11P49959 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 RPL7L1P9-201ENST00000431298 745 ntBASIC6.03□□□□□ -1.44
MRE11P49959 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
MRE11P49959 MTND5P2-201ENST00000442927 1142 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AL353898.1-201ENST00000444055 238 ntBASIC6.03□□□□□ -1.44
MRE11P49959 HSFY3P-201ENST00000444242 1191 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.03□□□□□ -1.44
MRE11P49959 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 NPM1P13-201ENST00000452663 865 ntBASIC6.03□□□□□ -1.44
MRE11P49959 RPL7P32-201ENST00000457119 744 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AL161747.1-201ENST00000480068 358 ntBASIC6.03□□□□□ -1.44
MRE11P49959 RPS21P4-201ENST00000487122 248 ntBASIC6.03□□□□□ -1.44
MRE11P49959 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.03□□□□□ -1.44
MRE11P49959 MTND5P13-201ENST00000513046 1079 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.03□□□□□ -1.44
MRE11P49959 PDCL2P2-201ENST00000533651 189 ntBASIC6.03□□□□□ -1.44
MRE11P49959 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.03□□□□□ -1.44
MRE11P49959 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.03□□□□□ -1.44
MRE11P49959 AC012213.3-201ENST00000577199 777 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AP001269.3-201ENST00000588718 329 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.03□□□□□ -1.44
MRE11P49959 SUGT1P3-202ENST00000604259 383 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AC083809.1-201ENST00000615051 472 ntBASIC6.03□□□□□ -1.44
MRE11P49959 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.03□□□□□ -1.44
MRE11P49959 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AL158163.2-201ENST00000619110 700 ntBASIC6.03□□□□□ -1.44
MRE11P49959 AC006840.1-201ENST00000623069 542 ntBASIC6.03□□□□□ -1.44
MRE11P49959 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.03□□□□□ -1.44
MRE11P49959 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
MRE11P49959 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.03□□□□□ -1.44
MRE11P49959 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.03□□□□□ -1.44
MRE11P49959 AC006210.2-201ENST00000367074 1545 ntBASIC6.03□□□□□ -1.44
MRE11P49959 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
MRE11P49959 UGT2B26P-201ENST00000508672 1613 ntBASIC6.03□□□□□ -1.44
MRE11P49959 NXF4-202ENST00000416098 1465 ntBASIC6.02□□□□□ -1.44
MRE11P49959 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
MRE11P49959 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms