Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CENPFP49454 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPFP49454 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPFP49454 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CENPFP49454 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPFP49454 AC097713.2-201ENST00000430199 356 ntBASIC4.27□□□□□ -1.73
CENPFP49454 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPFP49454 AC068790.5-201ENST00000602741 355 ntBASIC4.27□□□□□ -1.73
CENPFP49454 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CENPFP49454 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CENPFP49454 AC068870.3-201ENST00000625077 2536 ntBASIC4.27□□□□□ -1.73
CENPFP49454 SNORD35B-201ENST00000363660 87 ntBASIC4.27□□□□□ -1.73
CENPFP49454 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPFP49454 AC087650.1-201ENST00000431445 468 ntBASIC4.27□□□□□ -1.73
CENPFP49454 PTP4A1P3-201ENST00000433661 420 ntBASIC4.27□□□□□ -1.73
CENPFP49454 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPFP49454 AC010342.1-201ENST00000514047 877 ntBASIC4.27□□□□□ -1.73
CENPFP49454 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPFP49454 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.27□□□□□ -1.73
CENPFP49454 RNA5SP439-201ENST00000617595 124 ntBASIC4.27□□□□□ -1.73
CENPFP49454 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CENPFP49454 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPFP49454 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.27□□□□□ -1.73
CENPFP49454 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CENPFP49454 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPFP49454 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPFP49454 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
CENPFP49454 RPS26P4-201ENST00000431743 355 ntBASIC4.27□□□□□ -1.73
CENPFP49454 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPFP49454 EIF4A1P11-201ENST00000451239 222 ntBASIC4.27□□□□□ -1.73
CENPFP49454 AC069306.1-201ENST00000507006 843 ntBASIC4.27□□□□□ -1.73
CENPFP49454 IGHV3-32-201ENST00000519182 355 ntBASIC4.27□□□□□ -1.73
CENPFP49454 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPFP49454 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPFP49454 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPFP49454 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPFP49454 AC119744.1-201ENST00000454746 1715 ntBASIC4.26□□□□□ -1.73
CENPFP49454 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPFP49454 AC083837.1-201ENST00000565297 2994 ntBASIC4.26□□□□□ -1.73
CENPFP49454 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPFP49454 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPFP49454 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.26□□□□□ -1.73
CENPFP49454 RPL12P22-201ENST00000519073 490 ntBASIC4.26□□□□□ -1.73
CENPFP49454 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPFP49454 AC124068.1-201ENST00000563131 678 ntBASIC4.26□□□□□ -1.73
CENPFP49454 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.26□□□□□ -1.73
CENPFP49454 AL353743.1-202ENST00000431724 1695 ntBASIC4.26□□□□□ -1.73
CENPFP49454 OR51H2P-202ENST00000641424 3046 ntBASIC4.26□□□□□ -1.73
CENPFP49454 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPFP49454 MTCO1P24-201ENST00000515438 1558 ntBASIC4.26□□□□□ -1.73
CENPFP49454 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPFP49454 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPFP49454 SNORD96B-201ENST00000386148 79 ntBASIC4.26□□□□□ -1.73
CENPFP49454 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPFP49454 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPFP49454 AL451044.1-201ENST00000604867 238 ntBASIC4.26□□□□□ -1.73
CENPFP49454 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPFP49454 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPFP49454 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CENPFP49454 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CENPFP49454 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPFP49454 RPL7P60-201ENST00000397636 735 ntBASIC4.25□□□□□ -1.73
CENPFP49454 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPFP49454 AL121878.1-201ENST00000418638 859 ntBASIC4.25□□□□□ -1.73
CENPFP49454 AL591419.1-201ENST00000427423 339 ntBASIC4.25□□□□□ -1.73
CENPFP49454 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPFP49454 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.25□□□□□ -1.73
CENPFP49454 PHBP14-201ENST00000512887 367 ntBASIC4.25□□□□□ -1.73
CENPFP49454 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
CENPFP49454 MIR5186-201ENST00000577504 120 ntBASIC4.25□□□□□ -1.73
CENPFP49454 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPFP49454 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPFP49454 SNORD66.1-201ENST00000391230 76 ntBASIC4.25□□□□□ -1.73
CENPFP49454 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.25□□□□□ -1.73
CENPFP49454 OOSP1P1-201ENST00000423265 274 ntBASIC4.25□□□□□ -1.73
CENPFP49454 ATP5JP1-201ENST00000431631 322 ntBASIC4.25□□□□□ -1.73
CENPFP49454 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.25□□□□□ -1.73
CENPFP49454 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPFP49454 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CENPFP49454 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.25□□□□□ -1.73
CENPFP49454 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPFP49454 AC004944.1-201ENST00000517807 3059 ntBASIC4.25□□□□□ -1.73
CENPFP49454 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CENPFP49454 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPFP49454 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CENPFP49454 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CENPFP49454 SNORA5.1-201ENST00000384275 131 ntBASIC4.25□□□□□ -1.73
CENPFP49454 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPFP49454 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPFP49454 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPFP49454 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.25□□□□□ -1.73
CENPFP49454 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CENPFP49454 NCAPGP2-201ENST00000557911 754 ntBASIC4.25□□□□□ -1.73
CENPFP49454 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPFP49454 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPFP49454 AC019278.1-201ENST00000623516 479 ntBASIC4.25□□□□□ -1.73
CENPFP49454 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CENPFP49454 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CENPFP49454 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CENPFP49454 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms